RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CLNKQ7Z7G1 428 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 NLRX1Q86UT6 975 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 FAM160B2Q86V87 743 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 ACSF2Q96CM8 615 aaPredicted RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 MRPL47Q9HD33 250 aaKnown RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 ZNF219Q9P2Y4 722 aaPredicted RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 ALOX15BO15296 676 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 HLA-DRAP01903 254 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 KRT1P04264 644 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 EIF2AK2P19525 551 aaKnown RBP19.46■□□□□ 0.71
HPS3-204ENST00000462030 ATP4AP20648 1035 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 GPX6P59796 221 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 RFWD2Q8NHY2 731 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 CLEC4DQ8WXI8 215 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 DEFB129Q9H1M3 183 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 CLRN2A0PK11 232 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 ACO1P21399 889 aaKnown RBP19.46■□□□□ 0.71
HPS3-204ENST00000462030 MORF4L2Q15014 288 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 TLE6Q9H808 572 aa19.46■□□□□ 0.71
HPS3-204ENST00000462030 GNA15P30679 374 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 CTCFP49711 727 aaPredicted RBP19.45■□□□□ 0.7
HPS3-204ENST00000462030 BPIFB4P59827 614 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 WDR72Q3MJ13 1102 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 KHDC1Q4VXA5 237 aaKnown RBP19.45■□□□□ 0.7
HPS3-204ENST00000462030 BRDTQ58F21 947 aaPredicted RBP19.45■□□□□ 0.7
HPS3-204ENST00000462030 TDRD10Q5VZ19 366 aaKnown RBP19.45■□□□□ 0.7
HPS3-204ENST00000462030 TXNRD3NBQ6F5E7 133 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 TMEM270Q6UE05 265 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 ABRAQ8N0Z2 381 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 FEZF2Q8TBJ5 459 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 ZNF622Q969S3 477 aaKnown RBP eCLIP19.45■□□□□ 0.7
HPS3-204ENST00000462030 TMEM121Q9BTD3 319 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 HOMER2Q9NSB8 354 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 TBC1D22BQ9NU19 505 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 SLC24A2Q9UI40 661 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 LNPEPQ9UIQ6 1025 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 MYH9P35579 1960 aaKnown RBP19.45■□□□□ 0.7
HPS3-204ENST00000462030 CLUHO75153 1309 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 NFASCO94856 1347 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 PTPRJQ12913 1337 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 IFNB1P01574 187 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 ICAM1P05362 532 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 MARK3P27448 753 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 PIK3CAP42336 1068 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 SESN3P58005 492 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 WDR44Q5JSH3 913 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 EFHC2Q5JST6 749 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 FYB2Q5VWT5 728 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 CENPUQ71F23 418 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 CDAN1Q8IWY9 1227 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 BICD1Q96G01 975 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 CADM1Q9BY67 442 aaKnown RBP19.45■□□□□ 0.7
HPS3-204ENST00000462030 APOBEC3GQ9HC16 384 aaKnown RBP19.45■□□□□ 0.7
HPS3-204ENST00000462030 FEM1BQ9UK73 627 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 PCDHB4Q9Y5E5 795 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 IVNS1ABPQ9Y6Y0 642 aa19.45■□□□□ 0.7
HPS3-204ENST00000462030 SPDYE5A6NIY4 337 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 GOLGA8RI6L899 631 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 TNNI1P19237 187 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 SSTR1P30872 391 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 CETN2P41208 172 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 PSMC4P43686 418 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 ZNF252P-AS1Q0IIN9 211 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 TFDP1Q14186 410 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 OASLQ15646 514 aaKnown RBP19.44■□□□□ 0.7
HPS3-204ENST00000462030 DRICH1Q6PGQ1 229 aaPredicted RBP19.44■□□□□ 0.7
HPS3-204ENST00000462030 DSTYKQ6XUX3 929 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 C4orf50Q6ZRC1 276 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 TAS1R3Q7RTX0 852 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 PHF13Q86YI8 300 aaPredicted RBP19.44■□□□□ 0.7
HPS3-204ENST00000462030 LMNTD2Q8IXW0 634 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 RCOR2Q8IZ40 523 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 ZNF276Q8N554 614 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 DNAJC9Q8WXX5 260 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 RBM41Q96IZ5 413 aaKnown RBP19.44■□□□□ 0.7
HPS3-204ENST00000462030 KLF6Q99612 283 aaPredicted RBP19.44■□□□□ 0.7
HPS3-204ENST00000462030 SENP7Q9BQF6 1050 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 ANKEF1Q9NU02 776 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 TCEAL9Q9UHQ7 104 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 RABGEF1Q9UJ41 708 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 SCINQ9Y6U3 715 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 COL2A1P02458 1487 aaPredicted RBP19.44■□□□□ 0.7
HPS3-204ENST00000462030 MAP3K13O43283 966 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 PLA2G6O60733 806 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 TJP3O95049 919 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 MYCLP12524 364 aaPredicted RBP19.44■□□□□ 0.7
HPS3-204ENST00000462030 GLRA2P23416 452 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 CAP2P40123 477 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 ZACNQ401N2 412 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 SPDYAQ5MJ70 313 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 SPOCD1Q6ZMY3 1216 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 CPXCR1Q8N123 301 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 MASTLQ96GX5 879 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 TAAR1Q96RJ0 339 aa19.44■□□□□ 0.7
HPS3-204ENST00000462030 LBHD1Q9BQE6 289 aaPredicted RBP19.44■□□□□ 0.7
HPS3-204ENST00000462030 ZWINTO95229 277 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 VNN1O95497 513 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 ACADSP16219 412 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 VCPP55072 806 aaKnown RBP19.43■□□□□ 0.7
HPS3-204ENST00000462030 GEMIN4P57678 1058 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms