RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 CDC42EP1Q00587 391 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 PICALMQ13492 652 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 SF3B3Q15393 1217 aaKnown RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 SRSF7Q16629 238 aaKnown RBP eCLIP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 NBPF8Q3BBV2 869 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 TSTD2Q5T7W7 516 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 ZNF788Q6ZQV5 615 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 GADL1Q6ZQY3 521 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 SEM1Q6ZVN7 128 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 DGKHQ86XP1 1220 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 MAGEB6Q8N7X4 407 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 NLGN4YQ8NFZ3 816 aaPredicted RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 COA7Q96BR5 231 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 GSTO2Q9H4Y5 243 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 ALG13Q9NP73 1137 aaKnown RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 ARPP21Q9UBL0 812 aaPredicted RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 NOB1Q9ULX3 412 aaKnown RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 LIMCH1Q9UPQ0 1083 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 TCRBV7S2A1N4TA0A589 114 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 IFRD1O00458 451 aaPredicted RBP4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 WNT10BO00744 389 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 DTNBO60941 627 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 C1QL1O75973 258 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 PRSS23O95084 383 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 AMY1AP04745 511 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 FPGSQ05932 587 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 MTM1Q13496 603 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 IL10RAQ13651 578 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 DHX8Q14562 1220 aaKnown RBP4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 EZH2Q15910 746 aaKnown RBP4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 C3orf36Q3SXR2 165 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 ZGPATQ8N5A5 531 aaKnown RBP4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 TOR1AIP2Q8NFQ8 470 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 JPH3Q8WXH2 748 aaPredicted RBP4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 PPM1EQ8WY54 764 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 TMEM125Q96AQ2 219 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 CLPTM1LQ96KA5 538 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 MYOCQ99972 504 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 C11orf54Q9H0W9 315 aaPredicted RBP4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 NEU2Q9Y3R4 380 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 IPPQ9Y573 584 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 WNT6Q9Y6F9 365 aa4.48□□□□□ -1.69
SPTLC1-203ENST00000461132 IKBKBO14920 756 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 MPPED1O15442 326 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 SGTAO43765 313 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 WDHD1O75717 1129 aaPredicted RBP4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 PAX3P23760 479 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 GRIA3P42263 894 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 SOX10P56693 466 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 CTXN1P60606 82 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 NOMO3P69849 1222 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 MINDY4Q4G0A6 757 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 NOMO2Q5JPE7 1267 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 CLNKQ7Z7G1 428 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 TTC7BQ86TV6 843 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 PAF1Q8N7H5 531 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 HASPINQ8TF76 798 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 KAT5Q92993 513 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 HSPBAP1Q96EW2 488 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 TIMP4Q99727 224 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 MAN1C1Q9NR34 630 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 INTS13Q9NVM9 706 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 BCCIPQ9P287 314 aaKnown RBP eCLIP4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 IP6K2Q9UHH9 426 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 SLC23A1Q9UHI7 598 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 SERPINB13Q9UIV8 391 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 ENTPD2Q9Y5L3 495 aa4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 CFAP20Q9Y6A4 193 aaKnown RBP4.47□□□□□ -1.69
SPTLC1-203ENST00000461132 CCDC189A1A4V9 331 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 HAUS5O94927 633 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 ZFPL1O95159 310 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 MTHFD1P11586 935 aaKnown RBP4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 VCAM1P19320 739 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 EDNRBP24530 442 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 SMARCA1P28370 1054 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 RPS7P62081 194 aaKnown RBP4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 ATP8B2P98198 1209 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 ZNF844Q08AG5 666 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 TARDBPQ13148 414 aaKnown RBP eCLIP4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 RAB39AQ14964 217 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 PEG10Q86TG7 708 aaKnown RBP4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 CPA6Q8N4T0 437 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 SH2D3CQ8N5H7 860 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 TFAP2BQ92481 460 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 SARAFQ96BY9 339 aa4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 PNMA8BQ9ULN7 279 aaPredicted RBP4.46□□□□□ -1.7
SPTLC1-203ENST00000461132 CCDC78A2IDD5 438 aa4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 WDR91A4D1P6 747 aa4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 MANSC4A6NHS7 340 aaPredicted RBP4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 VSTM5A8MXK1 200 aa4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 ERC2O15083 957 aa4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 GRM6O15303 877 aa4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 ABLIM3O94929 683 aa4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 ZRANB2O95218 330 aaKnown RBP eCLIP4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 CD1AP06126 327 aa4.45□□□□□ -1.7
SPTLC1-203ENST00000461132 SRGNP10124 158 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms