RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 HK2P52789 917 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 HUNKP57058 714 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 SCAND1P57086 179 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 CCT2P78371 535 aaKnown RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 GTF2H3Q13889 308 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 KIR3DS1Q14943 382 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 TMEM132BQ14DG7 1078 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 RABEP1Q15276 862 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 FSCN1Q16658 493 aaKnown RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 DNTTIP2Q5QJE6 756 aaKnown RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 IFIT1BQ5T764 474 aaKnown RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 BICRALQ6AI39 1079 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 APOA5Q6Q788 366 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 TMEM179Q6ZVK1 233 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 ARMC9Q7Z3E5 817 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 IQCA1Q86XH1 822 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 CCDC83Q8IWF9 413 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 CMIPQ8IY22 773 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 NUP133Q8WUM0 1156 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 CLEC4DQ8WXI8 215 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 PIBF1Q8WXW3 757 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 OPTNQ96CV9 577 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 PEX11GQ96HA9 241 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 AIFM3Q96NN9 605 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 ARPC5LQ9BPX5 153 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 TMEM47Q9BQJ4 181 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 TM6SF1Q9BZW5 370 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 MS4A5Q9H3V2 200 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 PAK6Q9NQU5 681 aaPredicted RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 CCM2LQ9NUG4 571 aaPredicted RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 RBM28Q9NW13 759 aaKnown RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 MTMR4Q9NYA4 1195 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 FBXO9Q9UK97 447 aaPredicted RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 NUDT5Q9UKK9 219 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 TPCN1Q9ULQ1 816 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 ZHX2Q9Y6X8 837 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 A0A0G2JMZ2 1700 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 A0A1W2PQJ5 194 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ERICH2A1L162 156 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 KLHL33A6NCF5 533 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 CCDC69A6NI79 296 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 RASSF10A6NK89 507 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ACOT7O00154 380 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 PSPNO60542 156 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 CTNND1O60716 968 aaKnown RBP5.6□□□□□ -1.51
SF3A3-202ENST00000460925 H2AFYO75367 372 aaKnown RBP5.6□□□□□ -1.51
SF3A3-202ENST00000460925 MED26O95402 600 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 TTLL1O95922 423 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 NDUFB10O96000 172 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 LTFP02788 710 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ASNSP08243 561 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 DBHP09172 617 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 PCP11498 1178 aaKnown RBP5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ENPP1P22413 925 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 CYP2C19P33261 490 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ARL4AP40617 200 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 HMGCS2P54868 508 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ERVFRD-1P60508 538 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 SNAP25P60880 206 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 SPP2Q13103 211 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ODF1Q14990 250 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 CDC37Q16543 378 aaPredicted RBP5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ME3Q16798 604 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 SLC35G1Q2M3R5 365 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 MAP9Q49MG5 647 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 FAM83BQ5T0W9 1011 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 PAQR3Q6TCH7 311 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 GADL1Q6ZQY3 521 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 DGKHQ86XP1 1220 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 RASAL3Q86YV0 1011 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 FOXRED1Q96CU9 486 aaPredicted RBP5.6□□□□□ -1.51
SF3A3-202ENST00000460925 CCDC17Q96LX7 622 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 AGXT2Q9BYV1 514 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 RANBP17Q9H2T7 1088 aaKnown RBP5.6□□□□□ -1.51
SF3A3-202ENST00000460925 KAT14Q9H8E8 782 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ZNF287Q9HBT7 754 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ARNT2Q9HBZ2 717 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 FBXO28Q9NVF7 368 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 RIC8BQ9NVN3 520 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 MSRAQ9UJ68 235 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ABT1Q9ULW3 272 aaKnown RBP5.6□□□□□ -1.51
SF3A3-202ENST00000460925 ASB1Q9Y576 335 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 CENPFP49454 3210 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 LCTP09848 1927 aa5.6□□□□□ -1.51
SF3A3-202ENST00000460925 RBBP6Q7Z6E9 1792 aaKnown RBP5.6□□□□□ -1.51
SF3A3-202ENST00000460925 DOCK3Q8IZD9 2030 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 WDR19Q8NEZ3 1342 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 JAK2O60674 1132 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 KRT18P05783 430 aaKnown RBP5.59□□□□□ -1.51
SF3A3-202ENST00000460925 PF4V1P10720 104 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 PDHBP11177 359 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 TOP1P11387 765 aaKnown RBP5.59□□□□□ -1.51
SF3A3-202ENST00000460925 LPOP22079 712 aaPredicted RBP5.59□□□□□ -1.51
SF3A3-202ENST00000460925 PDIA3P30101 505 aaKnown RBP5.59□□□□□ -1.51
SF3A3-202ENST00000460925 SLC16A2P36021 539 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 MTNR1BP49286 362 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 METAP2P50579 478 aaKnown RBP eCLIP5.59□□□□□ -1.51
SF3A3-202ENST00000460925 SLC9A5Q14940 896 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 MINDY4Q4G0A6 757 aa5.59□□□□□ -1.51
SF3A3-202ENST00000460925 TIGD5Q53EQ6 642 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms