RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 DPY19L2P1Q6NXN4 242 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 PRSS55Q6UWB4 352 aaPredicted RBP10.88□□□□□ -0.67
UPF2-204ENST00000460569 TMC7Q7Z402 723 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 OSTM1Q86WC4 334 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 VSTM4Q8IW00 320 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 OR6B3Q8NGW1 331 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 SPPL3Q8TCT6 385 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 KBTBD7Q8WVZ9 684 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 AUTS2Q8WXX7 1259 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 LRCH3Q96II8 777 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 FAM81BQ96LP2 452 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 KREMEN1Q96MU8 473 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 TCF25Q9BQ70 676 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 SNX25Q9H3E2 840 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 TLR9Q9NR96 1032 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 CISHQ9NSE2 258 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 DDX43Q9NXZ2 648 aaKnown RBP10.88□□□□□ -0.67
UPF2-204ENST00000460569 DNAJC12Q9UKB3 198 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 ITIH6Q6UXX5 1313 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 TMEM265A0A087WTH1 108 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.87□□□□□ -0.67
UPF2-204ENST00000460569 H7C4K7 107 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 RFXAPO00287 272 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 LPXNO60711 386 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 ADCY5O95622 1261 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 CTSAP10619 480 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 ACAT1P24752 427 aaKnown RBP10.87□□□□□ -0.67
UPF2-204ENST00000460569 DNAJB1P25685 340 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 LHX1P48742 406 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 NDST1P52848 882 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 ERVFC1P60507 584 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 DSG1Q02413 1049 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 INCA1Q0VD86 236 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 BMS1Q14692 1282 aaKnown RBP10.87□□□□□ -0.67
UPF2-204ENST00000460569 ZNF697Q5TEC3 545 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 SPECC1LQ69YQ0 1117 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 PDXDC1Q6P996 788 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 ANKS3Q6ZW76 656 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 ENOSF1Q7L5Y1 443 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 CACNA2D4Q7Z3S7 1137 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 LIMS2Q7Z4I7 341 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 THEM5Q8N1Q8 247 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 TTC39CQ8N584 583 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 SPATA18Q8TC71 538 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 PIK3R5Q8WYR1 880 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 MRFAP1L1Q96HT8 127 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 LMAN2LQ9H0V9 348 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 NLRC4Q9NPP4 1024 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 MRPL17Q9NRX2 175 aaKnown RBP10.87□□□□□ -0.67
UPF2-204ENST00000460569 CHST7Q9NS84 486 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 CEP72Q9P209 647 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 HMGXB4Q9UGU5 601 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 BARX2Q9UMQ3 279 aaPredicted RBP10.87□□□□□ -0.67
UPF2-204ENST00000460569 DAAM1Q9Y4D1 1078 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 PCDHB4Q9Y5E5 795 aa10.87□□□□□ -0.67
UPF2-204ENST00000460569 A8MXQ7 604 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 GABRDO14764 452 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 HCRTO43612 131 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 CILPO75339 1184 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 OAZ2O95190 189 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 CXCL14O95715 111 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 FAM163BP0C2L3 166 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 PNMA6AP0CW24 399 aaPredicted RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 KRT5P13647 590 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 RPL17P18621 184 aaKnown RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 PCSK1P29120 753 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 GNL1P36915 607 aaPredicted RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 USP8P40818 1118 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 MRE11P49959 708 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 ORC1Q13415 861 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 SMC1AQ14683 1233 aaKnown RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 DRAP1Q14919 205 aaPredicted RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 PTPN14Q15678 1187 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 ZNF394Q53GI3 561 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 KIAA0319Q5VV43 1072 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 TMEM270Q6UE05 265 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 TMC6Q7Z403 805 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 GLYCTKQ8IVS8 523 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 UBR7Q8N806 425 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 RBBP8NLQ8NC74 664 aaPredicted RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 LNX1Q8TBB1 728 aaPredicted RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 MICAL1Q8TDZ2 1067 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 SHC3Q92529 594 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 JAKMIP2Q96AA8 810 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 SPAG5Q96R06 1193 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 RTP3Q9BQQ7 232 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 SYT15Q9BQS2 421 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 NUP58Q9BVL2 599 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 NAA15Q9BXJ9 866 aaKnown RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 TTYH1Q9H313 450 aaPredicted RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 PRDM12Q9H4Q4 367 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 FAM124BQ9H5Z6 455 aaPredicted RBP10.86□□□□□ -0.67
UPF2-204ENST00000460569 MTRRQ9UBK8 725 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 FBXL5Q9UKA1 691 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 SSX2IPQ9Y2D8 614 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 STXBP5LQ9Y2K9 1186 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 PCDHGC5Q9Y5F6 944 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.86□□□□□ -0.671e-8■■■■■ 39.1
UPF2-204ENST00000460569 PLXNA3P51805 1871 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms