RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 HTR3AP46098 478 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 CASP5P51878 434 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 CHN2P52757 468 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 PTTG1IPP53801 180 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 FMO1Q01740 532 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 TCF15Q12870 199 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 CNGA2Q16280 664 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 UTP14CQ5TAP6 766 aaKnown RBP4.23□□□□□ -1.73
RFC4-211ENST00000460408 MED25Q71SY5 747 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 SESTD1Q86VW0 696 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 GSPT2Q8IYD1 628 aaKnown RBP4.23□□□□□ -1.73
RFC4-211ENST00000460408 FITM2Q8N6M3 262 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 PARD3BQ8TEW8 1205 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 NTN5Q8WTR8 489 aaPredicted RBP4.23□□□□□ -1.73
RFC4-211ENST00000460408 GJA10Q969M2 543 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 MSLNLQ96KJ4 702 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 RPS6KC1Q96S38 1066 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 MNTQ99583 582 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 VKORC1Q9BQB6 163 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 SMURF2Q9HAU4 748 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 SLAMF7Q9NQ25 335 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 PACSIN3Q9UKS6 424 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 AGAP1Q9UPQ3 857 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 ZNF785A8K8V0 405 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 SERPINB3P29508 390 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 PRIM2P49643 509 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 SUMO3P55854 103 aaPredicted RBP4.22□□□□□ -1.73
RFC4-211ENST00000460408 NOMO3P69849 1222 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 NHLH2Q02577 135 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 LONRF1Q17RB8 773 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 RABL3Q5HYI8 236 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 NOMO2Q5JPE7 1267 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 AGAP9Q5VTM2 703 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 PPP1R32Q7Z5V6 425 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 RHOT2Q8IXI1 618 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 TBC1D15Q8TC07 691 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 NUP133Q8WUM0 1156 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 SCAMP4Q969E2 229 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 NMD3Q96D46 503 aaKnown RBP4.22□□□□□ -1.73
RFC4-211ENST00000460408 SUCLG2Q96I99 432 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 TBCBQ99426 244 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 MPHOSPH6Q99547 160 aaKnown RBP4.22□□□□□ -1.73
RFC4-211ENST00000460408 ELAC2Q9BQ52 826 aaKnown RBP4.22□□□□□ -1.73
RFC4-211ENST00000460408 TLR10Q9BXR5 811 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 GPR87Q9BY21 358 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 KIAA1586Q9HCI6 787 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 CNNM1Q9NRU3 951 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 VSX1Q9NZR4 365 aaPredicted RBP4.22□□□□□ -1.73
RFC4-211ENST00000460408 POGKQ9P215 609 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 COL20A1Q9P218 1284 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 FNIP2Q9P278 1114 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 PTGFRNQ9P2B2 879 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 CPNE7Q9UBL6 633 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 CHST2Q9Y4C5 530 aa4.22□□□□□ -1.73
RFC4-211ENST00000460408 CCDC78A2IDD5 438 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 GOLGA6L6A8MZA4 724 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 F8W8V4 182 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 FAM20BO75063 409 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 CHEK2O96017 543 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 IFIT2P09913 472 aaKnown RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 CKBP12277 381 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 FCER1AP12319 257 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 BRAFP15056 766 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 APOBEC3AP31941 199 aaPredicted RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 ZNF135P52742 658 aaPredicted RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 AK2P54819 239 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 PSMC1P62191 440 aaKnown RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 ZNF543Q08ER8 600 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 IFIT5Q13325 482 aaKnown RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 BRD3Q15059 726 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 TOGARAM2Q6ZUX3 1019 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 MICU3Q86XE3 530 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 VRK3Q8IV63 474 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 RNF152Q8N8N0 203 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 PDPRQ8NCN5 879 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 PGBD4Q96DM1 585 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 ZC3H10Q96K80 434 aaKnown RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 TINAGL1Q9GZM7 467 aaPredicted RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 RIOX1Q9H6W3 641 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 MRPS18AQ9NVS2 196 aaKnown RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 AFF4Q9UHB7 1163 aaKnown RBP4.21□□□□□ -1.74
RFC4-211ENST00000460408 CORO2BQ9UQ03 480 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.21□□□□□ -1.74
RFC4-211ENST00000460408 COL4A3Q01955 1670 aa4.21□□□□□ -1.74
RFC4-211ENST00000460408 A0A087WWL8 130 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 GRID2IPA4D2P6 1211 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 TRIM43BA6NCK2 446 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 RHPN2P1A8MT19 583 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 RASA4BC9J798 803 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 FOXN3O00409 490 aaPredicted RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 BTN3A1O00481 513 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 KPNA5O15131 536 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 ZNF185O15231 689 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 RASA4O43374 803 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 UNC5CO95185 931 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 PIM1P11309 404 aaPredicted RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 TSHRP16473 764 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 FDXRP22570 491 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 TOB1P50616 345 aaPredicted RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 C21orf58P58505 322 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms