RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 EN1Q05925 392 aaPredicted RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 SGSM1Q2NKQ1 1148 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 NIPA1Q7RTP0 329 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 MIER3Q7Z3K6 550 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 SDCCAG8Q86SQ7 713 aaPredicted RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 CBWD2Q8IUF1 395 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 RHOT1Q8IXI2 618 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 EXD1Q8NHP7 514 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 TAS1R2Q8TE23 839 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 OSBPL1AQ9BXW6 950 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 OSBPL8Q9BZF1 889 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 RMI1Q9H9A7 625 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 RAB20Q9NX57 234 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 LMCD1Q9NZU5 365 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 MRPL11Q9Y3B7 192 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 PARP14Q460N5 1801 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 ECE2O60344 883 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 PLA2G6O60733 806 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 SPAG7O75391 227 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 GH2P01242 217 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 LMNAP02545 664 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 PTPN4P29074 926 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 VPS41P49754 854 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 RAD23BP54727 409 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 UBXN2AP68543 259 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 MRPS35P82673 323 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 ADCY1Q08828 1119 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 LBRQ14739 615 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 CTC1Q2NKJ3 1217 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 P3H1Q32P28 736 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 ZNF280DQ6N043 979 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 MON1BQ7L1V2 547 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 PRUNE1Q86TP1 453 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 LONP2Q86WA8 852 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 PLPP6Q8IY26 295 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 KCNV2Q8TDN2 545 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 DHX38Q92620 1227 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 NUDCD1Q96RS6 583 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 SMC6Q96SB8 1091 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 DCLRE1BQ9H816 532 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 SLCO1B3Q9NPD5 702 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 FETUBQ9UGM5 382 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 SLC24A2Q9UI40 661 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 ZMYND8Q9ULU4 1186 aaPredicted RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 EXOC7Q9UPT5 735 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 PCDHAC2Q9Y5I4 1007 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 GSTTP1A0A1W2PQM5 241 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 EME2A4GXA9 379 aaPredicted RBP8.97□□□□□ -0.97
VPS50-208ENST00000458707 GOLGA8IPA6NC78 632 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 GOLGA8JA6NMD2 632 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 POLRMTO00411 1230 aaKnown RBP8.97□□□□□ -0.97
VPS50-208ENST00000458707 HGSO14964 777 aaPredicted RBP8.97□□□□□ -0.97
VPS50-208ENST00000458707 AP1G2O75843 785 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 RTN3O95197 1032 aaPredicted RBP8.97□□□□□ -0.97
VPS50-208ENST00000458707 FESP07332 822 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 ITGB5P18084 799 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 ATP4AP20648 1035 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 EPHB2P29323 1055 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 RPA3P35244 121 aaPredicted RBP8.97□□□□□ -0.97
VPS50-208ENST00000458707 QARSP47897 775 aaKnown RBP8.97□□□□□ -0.97
VPS50-208ENST00000458707 TAS2R40P59535 323 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 SLC1A5Q15758 541 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 PKN2Q16513 984 aaKnown RBP8.97□□□□□ -0.97
VPS50-208ENST00000458707 PCNX4Q63HM2 1172 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 CYP4F22Q6NT55 531 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 C15orf39Q6ZRI6 1047 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 MAEAQ7L5Y9 396 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 PODNQ7Z5L7 613 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 MAP4K3Q8IVH8 894 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 LMNTD2Q8IXW0 634 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.97□□□□□ -0.97
VPS50-208ENST00000458707 LRRC8CQ8TDW0 803 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 C17orf50Q8WW18 174 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 VCPIP1Q96JH7 1222 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 PHACTR1Q9C0D0 580 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 KIF9Q9HAQ2 790 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 SAYSD1Q9NPB0 183 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 TBX20Q9UMR3 447 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 TMX2Q9Y320 296 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 PCDHB2Q9Y5E7 798 aa8.97□□□□□ -0.97
VPS50-208ENST00000458707 NDC80O14777 642 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 ALOX15BO15296 676 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 SLC16A4O15374 487 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 LIASO43766 372 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 AHCYL1O43865 530 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 ENTPD3O75355 529 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 ZWINTO95229 277 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 NPTXRO95502 500 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 NAT1P18440 290 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 CNGA1P29973 690 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 PTDSS1P48651 473 aaKnown RBP8.96□□□□□ -0.97
VPS50-208ENST00000458707 HSD17B4P51659 736 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 PEX3P56589 373 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 BPIFB4P59827 614 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 CYP24A1Q07973 514 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 SFSWAPQ12872 951 aaKnown RBP8.96□□□□□ -0.97
VPS50-208ENST00000458707 TMED1Q13445 227 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 MORF4L2Q15014 288 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 AOC3Q16853 763 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms