RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ATG9AQ7Z3C6 839 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 ATG4AQ8WYN0 398 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 RHBDL2Q9NX52 303 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 SLC30A1Q9Y6M5 507 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 NRKQ7Z2Y5 1582 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 GUCA1CO95843 209 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 ALFQ53S48 1182 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 C12orf60Q5U649 245 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 CCDC60Q8IWA6 550 aaPredicted RBP20.52■□□□□ 0.88
SNX27-204ENST00000458013 GTF2A1LQ9UNN4 478 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 AGRPO00253 132 aa20.52■□□□□ 0.87
SNX27-204ENST00000458013 TAL1P17542 331 aaPredicted RBP20.52■□□□□ 0.87
SNX27-204ENST00000458013 GLRBP48167 497 aa20.52■□□□□ 0.87
SNX27-204ENST00000458013 RBP5P82980 135 aa20.52■□□□□ 0.87
SNX27-204ENST00000458013 HASPINQ8TF76 798 aa20.52■□□□□ 0.87
SNX27-204ENST00000458013 CPB2Q96IY4 423 aa20.52■□□□□ 0.87
SNX27-204ENST00000458013 KCTD10Q9H3F6 313 aa20.52■□□□□ 0.87
SNX27-204ENST00000458013 PFASO15067 1338 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 FAM47DPA6NHR8 397 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 STXBP3O00186 592 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 S100A5P33763 92 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 NUDT2P50583 147 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 C10orf120Q5SQS8 335 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 JADE3Q92613 823 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 FOPNLQ96NB1 174 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 A0A1B0GTH6 734 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 ITGB3P05106 788 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 CASP4P49662 377 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 PGS1Q32NB8 556 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 CLEC4GQ6UXB4 293 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 BRINP3Q76B58 766 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 BNIPLQ7Z465 357 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 C10orf53Q8N6V4 93 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 GRAMD1AQ96CP6 724 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 ZFP42Q96MM3 310 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 GPR63Q9BZJ6 419 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.51■□□□□ 0.87
SNX27-204ENST00000458013 RSPH10B2B2RC85 870 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 RSPH10BP0C881 870 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 HOXA7P31268 230 aaPredicted RBP20.51■□□□□ 0.87
SNX27-204ENST00000458013 ATF7IP2Q5U623 682 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 OTOAQ7RTW8 1153 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 CCT7Q99832 543 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 UBE2Q2LH0YL09 131 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 CST8O60676 142 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 GIMAP4Q9NUV9 329 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 ABI2Q9NYB9 513 aaPredicted RBP20.51■□□□□ 0.87
SNX27-204ENST00000458013 TSC22D2O75157 780 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 ALDH1A1P00352 501 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 BARGINQ6ZT62 677 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 TRPM8Q7Z2W7 1104 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 PLEKHA8Q96JA3 519 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 GPATCH2LQ9NWQ4 482 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 SH3BP1Q9Y3L3 701 aa20.51■□□□□ 0.87
SNX27-204ENST00000458013 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 PMPCBO75439 489 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 GPD1P21695 349 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 SERPINB10P48595 397 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 KCNT1Q5JUK3 1230 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 MEI1Q5TIA1 1274 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 VMP1Q96GC9 406 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 MAGEB10Q96LZ2 347 aaPredicted RBP20.5■□□□□ 0.87
SNX27-204ENST00000458013 KRT8P05787 483 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 NFIXQ14938 502 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 NR1I3Q14994 352 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 MAGED4Q96JG8 741 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 CNDP1Q96KN2 507 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 CAAP1Q9H8G2 361 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 TFE3P19532 575 aaPredicted RBP20.5■□□□□ 0.87
SNX27-204ENST00000458013 DNAJC3Q13217 504 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 PODNQ7Z5L7 613 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 PNKPQ96T60 521 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 THAP2Q9H0W7 228 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 SGPL1O95470 568 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 ITGA4P13612 1032 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 ABCE1P61221 599 aaKnown RBP20.5■□□□□ 0.87
SNX27-204ENST00000458013 DDX39BQ13838 428 aaKnown RBP20.5■□□□□ 0.87
SNX27-204ENST00000458013 CYP4F12Q9HCS2 524 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 DAGLAQ9Y4D2 1042 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 TRAF7Q6Q0C0 670 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 CCNI2Q6ZMN8 369 aaPredicted RBP20.5■□□□□ 0.87
SNX27-204ENST00000458013 BBS2Q9BXC9 721 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 SPASTQ9UBP0 616 aa20.5■□□□□ 0.87
SNX27-204ENST00000458013 LAMC1P11047 1609 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 CFAP74Q9C0B2 1584 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 KCNK10P57789 538 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 PAN2Q504Q3 1202 aaKnown RBP20.49■□□□□ 0.87
SNX27-204ENST00000458013 VN1R5Q7Z5H4 357 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 ADSSL1Q8N142 457 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 RUVBL2Q9Y230 463 aaKnown RBP20.49■□□□□ 0.87
SNX27-204ENST00000458013 TAF6LQ9Y6J9 622 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 RPS6KA5O75582 802 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 BLOC1S5Q8TDH9 187 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 FAM111AQ96PZ2 611 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.49■□□□□ 0.87
SNX27-204ENST00000458013 NAGPAQ9UK23 515 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 SERPINB4P48594 390 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 CDC42EP5Q6NZY7 148 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 MTMR4Q9NYA4 1195 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms