RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ACCSQ96QU6 501 aa17.04■□□□□ 0.32
CHCHD3-204ENST00000457942 ASB7Q9H672 318 aa17.04■□□□□ 0.32
CHCHD3-204ENST00000457942 ZFP14Q9HCL3 533 aa17.04■□□□□ 0.32
CHCHD3-204ENST00000457942 CEP72Q9P209 647 aa17.04■□□□□ 0.32
CHCHD3-204ENST00000457942 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
CHCHD3-204ENST00000457942 SCN1AP35498 2009 aa17.04■□□□□ 0.32
CHCHD3-204ENST00000457942 ADRB2P07550 413 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 GJA1P17302 382 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 CCR2P41597 374 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 ALDH1A3P47895 512 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 EPHB3P54753 998 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 DUSP4Q13115 394 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 POSTNQ15063 836 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 TANGO2Q6ICL3 276 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 METTL23Q86XA0 190 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 PDILTQ8N807 584 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 NELL1Q92832 810 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 CLDN23Q96B33 292 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 ELSPBP1Q96BH3 223 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 IKZF4Q9H2S9 585 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 BRD9Q9H8M2 597 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 DPP3Q9NY33 737 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 C2CD2Q9Y426 696 aa17.03■□□□□ 0.32
CHCHD3-204ENST00000457942 NCAM2O15394 837 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 IL18RAPO95256 599 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 PAX3P23760 479 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 TAF6P49848 677 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 SRSF5Q13243 272 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 GPR17Q13304 367 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 MYBPC2Q14324 1141 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 SLC39A14Q15043 492 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 FAM78AQ5JUQ0 283 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 L1TD1Q5T7N2 865 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 POTEHQ6S545 545 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 PYM1Q9BRP8 204 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 FAM213AQ9BRX8 229 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 DSEQ9UL01 958 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 SLC27A5Q9Y2P5 690 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 PCDHB13Q9Y5F0 798 aa17.02■□□□□ 0.32
CHCHD3-204ENST00000457942 MTMR11A4FU01 709 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 SHISA7A6NL88 538 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 PIRO00625 290 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 NRG2O14511 850 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 GDF9O60383 454 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 MICAL2O94851 1124 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 HSP90AA1P07900 732 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 RPS9P46781 194 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 TFAMQ00059 246 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 FZD5Q13467 585 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 TEAD2Q15562 447 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 FOXD4L5Q5VV16 416 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 THEM5Q8N1Q8 247 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 ATAD1Q8NBU5 361 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 ZSCAN18Q8TBC5 510 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 FOXD4L4Q8WXT5 416 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 SMARCD2Q92925 531 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 DNAJC19Q96DA6 116 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 SAAL1Q96ER3 474 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 ZNF560Q96MR9 790 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 ZNF396Q96N95 335 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 ASB16Q96NS5 453 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 TMEM209Q96SK2 561 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 SEPT5Q99719 369 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 TRMT61BQ9BVS5 477 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 PANK4Q9NVE7 773 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 MRPS17Q9Y2R5 130 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 STYXL1Q9Y6J8 313 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 COL4A2P08572 1712 aa17.01■□□□□ 0.31
CHCHD3-204ENST00000457942 TICRRQ7Z2Z1 1910 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 A0A1W2PRU2 124 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 ANO9A1A5B4 782 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 CYB561D2O14569 222 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 PPP1R37O75864 691 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 VNN2O95498 520 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 TDGF1P13385 188 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 FCARP24071 287 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 ADSSP30520 456 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 CDR1P51861 262 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 DMWDQ09019 674 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 KCNA1Q09470 495 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 ALCAMQ13740 583 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 SV2CQ496J9 727 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 SLC39A12Q504Y0 691 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 LAIR1Q6GTX8 287 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 CENPPQ6IPU0 288 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17■□□□□ 0.31
CHCHD3-204ENST00000457942 CCDC65Q8IXS2 484 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 EFCAB13Q8IY85 973 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 NETO1Q8TDF5 533 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 CRISPLD1Q9H336 500 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 OLFML3Q9NRN5 406 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 RBAKQ9NYW8 714 aaPredicted RBP17■□□□□ 0.31
CHCHD3-204ENST00000457942 FRYQ5TBA9 3013 aa17■□□□□ 0.31
CHCHD3-204ENST00000457942 A0A087X0B3 334 aa16.99■□□□□ 0.31
CHCHD3-204ENST00000457942 SPTLC2O15270 562 aa16.99■□□□□ 0.31
CHCHD3-204ENST00000457942 SOAT2O75908 522 aa16.99■□□□□ 0.31
CHCHD3-204ENST00000457942 LDHAP00338 332 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-204ENST00000457942 GDI1P31150 447 aa16.99■□□□□ 0.31
CHCHD3-204ENST00000457942 VIPR2P41587 438 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms