RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 PDK1Q15118 436 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 EARS2Q5JPH6 523 aaKnown RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 EFHC1Q5JVL4 640 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 ICE2Q659A1 982 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 NOTUMQ6P988 496 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 ZNF720Q7Z2F6 126 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 SH3KBP1Q96B97 665 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 L2HGDHQ9H9P8 463 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 KLC4Q9NSK0 619 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PRG3Q9Y2Y8 225 aaPredicted RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 NRXN1Q9ULB1 1477 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 E2F8A0AVK6 867 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 MAP3K6O95382 1288 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PGK2P07205 417 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 NCAM1P13591 858 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 EEF1DP29692 281 aaKnown RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PSMC6P62333 389 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 GOLGA7BQ2TAP0 167 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 SV2CQ496J9 727 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 TEDDM1Q5T9Z0 273 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 RANBP17Q9H2T7 1088 aaKnown RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 CAMSAP1Q5T5Y3 1602 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 TCRBV5S4A2TA0A5A2 114 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 SNRPAP09012 282 aaKnown RBP12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 OR1G1P47890 313 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 AMHR2Q16671 573 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 FIGNQ5HY92 759 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 IL31Q6EBC2 164 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 EFHBQ8N7U6 833 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 CYP2W1Q8TAV3 490 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 TAS1R2Q8TE23 839 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 ATG4AQ8WYN0 398 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 MTMR12Q9C0I1 747 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 TRPC7Q9HCX4 862 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 CASS4Q9NQ75 786 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.44
SMARCAD1-204ENST00000457823 AP3B1O00203 1094 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 TLR2O60603 784 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 EPHB2P29323 1055 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 CXCL9Q07325 125 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 MGAT5BQ3V5L5 792 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 AGBL2Q5U5Z8 902 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 ANO5Q75V66 913 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 PNKPQ96T60 521 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 SEPT5Q99719 369 aaPredicted RBP12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 ZSWIM1Q9BR11 485 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 ROPN1BQ9BZX4 212 aaPredicted RBP12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 ROPN1Q9HAT0 212 aaPredicted RBP12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 MEGF6O75095 1541 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 STK25O00506 426 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 SERPINB9P50453 376 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 NBPF12Q5TAG4 269 aaPredicted RBP12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 FAXCQ5TGI0 409 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 CDKAL1Q5VV42 579 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 IPMKQ8NFU5 416 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 CENPKQ9BS16 269 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 TASP1Q9H6P5 420 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 ARHGAP20Q9P2F6 1191 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 DMGDHQ9UI17 866 aaKnown RBP12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 DIP2CQ9Y2E4 1556 aa12.27□□□□□ -0.45
SMARCAD1-204ENST00000457823 AP5Z1O43299 807 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 ZNF189O75820 626 aaPredicted RBP12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 CYP11B1P15538 503 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 SPRP35270 261 aaPredicted RBP12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 TAF6P49848 677 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 CENPCQ03188 943 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 MAPK7Q13164 816 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 DTX3LQ8TDB6 740 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 ZC3H15Q8WU90 426 aaKnown RBP12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 ERP27Q96DN0 273 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 PDCD2LQ9BRP1 358 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 ZFYVE28Q9HCC9 887 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 C20orf96Q9NUD7 363 aaPredicted RBP12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 GAS2O43903 313 aaKnown RBP12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 B3GAT3O94766 335 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 HIC1Q14526 733 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 LRRC8EQ6NSJ5 796 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 MDM1Q8TC05 714 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 ZNF507Q8TCN5 953 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 CCDC90BQ9GZT6 254 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 EHD4Q9H223 541 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 LATS2Q9NRM7 1088 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 ARHGEF38Q9NXL2 777 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 SLC30A1Q9Y6M5 507 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 SYNDIG1LA6NDD5 238 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 NDUFS3O75489 264 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 TMCC1O94876 653 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 POLBP06746 335 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 FAM200BP0CF97 657 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 HSD17B3P37058 310 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 C6orf10Q5SRN2 563 aa12.26□□□□□ -0.45
SMARCAD1-204ENST00000457823 MROH9Q5TGP6 573 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms