RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RFFLQ8WZ73 363 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 FBXL8Q96CD0 374 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 DDX27Q96GQ7 796 aaKnown RBP4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 CLSTN3Q9BQT9 956 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 LZTS2Q9BRK4 669 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 CLEC11AQ9Y240 323 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 NR2E3Q9Y5X4 410 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 SMCO2A6NFE2 343 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 PI4K2BG5E9Z4 385 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 STX16-NPEPL1H3BU86 382 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 ABLIM1O14639 778 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 THAP12O43422 761 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 GNAO1P09471 354 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 KRT13P13646 458 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 ANPEPP15144 967 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 NFKBIAP25963 317 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 STX2P32856 288 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 SCNN1DP51172 638 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 GDF10P55107 478 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 ARL4CP56559 192 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 MECOMQ03112 1051 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 HNRNPDQ14103 355 aaKnown RBP4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 FGD3Q5JSP0 725 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 VWA5B1Q5TIE3 1220 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 ITPRIPL1Q6GPH6 555 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 KLHDC10Q6PID8 442 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 Q6ZNX1 250 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 HPS6Q86YV9 775 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 UNC5BQ8IZJ1 945 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 MYOCDQ8IZQ8 938 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 PDCD7Q8N8D1 485 aaKnown RBP4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 SNX29Q8TEQ0 813 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 NOC3LQ8WTT2 800 aaKnown RBP4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 SERAC1Q96JX3 654 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 EGLN2Q96KS0 407 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 ANKRD27Q96NW4 1050 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 ZSWIM1Q9BR11 485 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 SIAEQ9HAT2 523 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM114A2Q9NRY5 505 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 RMND1Q9NWS8 449 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 TMCO1Q9UM00 188 aa4.8□□□□□ -1.64
DEPDC1-202ENST00000456315 HTR3EA5X5Y0 456 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 H3BRJ5 948 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 FCHO1O14526 889 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CETN3O15182 167 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 XPOTO43592 962 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 NDUFB5O43674 189 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SGPL1O95470 568 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CLIC3O95833 236 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PRKCGP05129 697 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 KIF5BP33176 963 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 EIF6P56537 245 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 RPL7AP62424 266 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF252P-AS1Q0IIN9 211 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC45A4Q5BKX6 768 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 DENND5BQ6ZUT9 1274 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 POLNQ7Z5Q5 900 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SFR1Q86XK3 245 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CATSPER3Q86XQ3 398 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 RAPGEF4Q8WZA2 1011 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 INPP5DQ92835 1189 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PRPF18Q99633 342 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC29A1Q99808 456 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 REEP2Q9BRK0 252 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 THTPAQ9BU02 230 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 GRIP2Q9C0E4 1043 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CNNM2Q9H8M5 875 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PCDH18Q9HCL0 1135 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PFDN4Q9NQP4 134 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SMYD2Q9NRG4 433 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TJP2Q9UDY2 1190 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 POU2F3Q9UKI9 436 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TNS3Q68CZ2 1445 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 A0A1B0GUL6 1792 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CCDC194A0A1B0GVG4 234 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 POC1B-GALNT4F8VUJ3 575 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TPD52L2O43399 206 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 FBXO21O94952 628 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC16A2P36021 539 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TCF7P36402 384 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 ATXN3P54252 364 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 KRT17Q04695 432 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 BCL2A1Q16548 175 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 RGS9BPQ6ZS82 235 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CATIPQ7Z7H3 387 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TTLL6Q8N841 843 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 NAT16Q8N8M0 369 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 GBP7Q8N8V2 638 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PRPF31Q8WWY3 499 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 DDX1Q92499 740 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 WASF1Q92558 559 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 ECSITQ9BQ95 431 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 LTB4R2Q9NPC1 389 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 GCNT4Q9P109 453 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 KLHL14Q9P2G3 628 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC17A6Q9P2U8 582 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 LGALS13Q9UHV8 139 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 HDAC9Q9UKV0 1011 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 STARD13Q9Y3M8 1113 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms