RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SYDE2Q5VT97 1194 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 ADAT2Q7Z6V5 191 aaKnown RBP4.3□□□□□ -1.72
RBM39-220ENST00000455343 ADGRD2Q7Z7M1 963 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 B3GNT8Q7Z7M8 397 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 ITPRIPQ8IWB1 547 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 ADGRG2Q8IZP9 1017 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 ARHGEF39Q8N4T4 335 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 LZTR1Q8N653 840 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 TMEM105Q8N8V8 129 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 NETO2Q8NC67 525 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 SPPL3Q8TCT6 385 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 ATP8B4Q8TF62 1192 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 DCAF4Q8WV16 495 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 TBC1D5Q92609 795 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 APBB2Q92870 758 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 IWS1Q96ST2 819 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 SPATA25Q9BR10 227 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 C16orf70Q9BSU1 422 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 ALG1Q9BT22 464 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 MTA3Q9BTC8 594 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 IFIH1Q9BYX4 1025 aaKnown RBP4.3□□□□□ -1.72
RBM39-220ENST00000455343 RNPEPQ9H4A4 650 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 BCAS3Q9H6U6 928 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 COL20A1Q9P218 1284 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 USP15Q9Y4E8 981 aaPredicted RBP4.3□□□□□ -1.72
RBM39-220ENST00000455343 ZNF292O60281 2723 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 PTPRSQ13332 1948 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 ADGRA3Q8IWK6 1321 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 MED19A0JLT2 244 aaPredicted RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 C2orf71A6NGG8 1288 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 TSPY2A6NKD2 308 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 M0R2C6 588 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 ENPP3O14638 875 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 RNF113AO15541 343 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 PRICKLE3O43900 615 aaPredicted RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 EIF3JO75822 258 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 DGKIO75912 1065 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 KRT37O76014 449 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 ITGB1P05556 798 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 ZFYP08048 801 aaPredicted RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 ZNF286BP0CG31 522 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 PDHBP11177 359 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 TDO2P48775 406 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 NDUFV1P49821 464 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 MFAP1P55081 439 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 GHRHRQ02643 423 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 ZNF543Q08ER8 600 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 EFEMP1Q12805 493 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 RTP5Q14D33 572 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 STXBP2Q15833 593 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 TMEM184AQ6ZMB5 413 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 DBX2Q6ZNG2 339 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 SEPT14Q6ZU15 432 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 CHST3Q7LGC8 479 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 DHX37Q8IY37 1157 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 FTSJ3Q8IY81 847 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 ADSSL1Q8N142 457 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 VN1R2Q8NFZ6 395 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 NSUN6Q8TEA1 469 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 ATP6V0A1Q93050 837 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 NKD2Q969F2 451 aaPredicted RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 PPP2R3CQ969Q6 453 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 CHMP4CQ96CF2 233 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 RMDN1Q96DB5 314 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 PEX11GQ96HA9 241 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 RCC1LQ96I51 464 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 SHDQ96IW2 340 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 RPGRIP1Q96KN7 1286 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 TAAR1Q96RJ0 339 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 SEC62Q99442 399 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 TMEM47Q9BQJ4 181 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 BDH2Q9BUT1 245 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 S1PR5Q9H228 398 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 INCENPQ9NQS7 918 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 ECHDC1Q9NTX5 307 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 TCP11L1Q9NUJ3 509 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 DLL3Q9NYJ7 618 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 GULP1Q9UBP9 304 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 ANAPC4Q9UJX5 808 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 NUDT5Q9UKK9 219 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 ISY1Q9ULR0 285 aaKnown RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 BARX2Q9UMQ3 279 aaPredicted RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 FAM186AA6NE01 2351 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 MCM3APO60318 1980 aa4.29□□□□□ -1.72
RBM39-220ENST00000455343 KMT2BQ9UMN6 2715 aaPredicted RBP4.29□□□□□ -1.72
RBM39-220ENST00000455343 TANC1Q9C0D5 1861 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 TRBV23OR9-2A0A075B6M9 112 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 C17orf102A2RUQ5 167 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 ORC4O43929 436 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 PPP1R11O60927 126 aaPredicted RBP4.28□□□□□ -1.72
RBM39-220ENST00000455343 HMMRO75330 724 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 CHRNA1P02708 482 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 APPP05067 770 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 SLC3A2P08195 630 aaKnown RBP4.28□□□□□ -1.72
RBM39-220ENST00000455343 ADRB1P08588 477 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 SMIM10L2AP0DMW4 78 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 SMIM10L2BP0DMW5 78 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 TGFB3P10600 412 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 TOP1P11387 765 aaKnown RBP4.28□□□□□ -1.72
RBM39-220ENST00000455343 PAMP19021 973 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms