RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MXI1P50539 228 aa30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 ARPP19P56211 112 aa30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 TPGS2Q68CL5 300 aa30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 ELMSAN1Q6PJG2 1045 aa30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 C12orf76Q8N812 135 aaPredicted RBP30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 OR10T2Q8NGX3 314 aa30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 SFXN1Q9H9B4 322 aa30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 ANO10Q9NW15 660 aa30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 PAPLNO95428 1278 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 ASS1P00966 412 aaKnown RBP30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 FAM163BP0C2L3 166 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 ATF2P15336 505 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 KCNQ1P51787 676 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 SMAD4Q13485 552 aaKnown RBP30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 PUS10Q3MIT2 529 aaKnown RBP30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 CBWD6Q4V339 395 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 CBWD3Q5JTY5 395 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 CBWD5Q5RIA9 395 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 TRIM59Q8IWR1 403 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 ADGRF2Q8IZF7 708 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 TMEM209Q96SK2 561 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 MMS19Q96T76 1030 aa30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 NXF1Q9UBU9 619 aaKnown RBP30.01■■■□□ 2.39
SMARCC1-203ENST00000454240 MBTPS2O43462 519 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 OR4Q2P0C623 313 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 CCDC192P0DO97 292 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 CPB1P15086 417 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 LHX1P48742 406 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 TNNC1P63316 161 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 GPR17Q13304 367 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 STX1AQ16623 288 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 ZNF667Q5HYK9 610 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 OSTM1Q86WC4 334 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 IRF2BP1Q8IU81 584 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 KBTBD7Q8WVZ9 684 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 ZCWPW1Q9H0M4 648 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 ADAM7Q9H2U9 754 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 DDX43Q9NXZ2 648 aaKnown RBP30■■■□□ 2.39
SMARCC1-203ENST00000454240 COQ4Q9Y3A0 265 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 C2orf16Q68DN1 1984 aa30■■■□□ 2.39
SMARCC1-203ENST00000454240 GRXCR2A6NFK2 248 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 TACC1O75410 805 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 ITIH3Q06033 890 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 TPD52L1Q16890 204 aaPredicted RBP29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 UVSSAQ2YD98 709 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 PTCRAQ6ISU1 281 aaPredicted RBP29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 RNF19BQ6ZMZ0 732 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 FBXL13Q8NEE6 735 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 CMASQ8NFW8 434 aaPredicted RBP29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 ELMO3Q96BJ8 720 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 ACBD6Q9BR61 282 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 APOL5Q9BWW9 433 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 AFF4Q9UHB7 1163 aaKnown RBP29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 MAFFQ9ULX9 164 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 POLIQ9UNA4 740 aa29.99■■■□□ 2.39
SMARCC1-203ENST00000454240 TCF20Q9UGU0 1960 aaKnown RBP29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 ZMYND10O75800 440 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 BMP1P13497 986 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 WARSP23381 471 aaKnown RBP29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 MYL7Q01449 175 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 RARS2Q5T160 578 aaKnown RBP29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 RTL10Q7L3V2 364 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 ENOX1Q8TC92 643 aaKnown RBP29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 SUSD6Q92537 303 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 SEMA4DQ92854 862 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 PI4K2AQ9BTU6 479 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 THAP9Q9H5L6 903 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 RAB20Q9NX57 234 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 ZDHHC7Q9NXF8 308 aa29.98■■■□□ 2.39
SMARCC1-203ENST00000454240 SPDYE4A6NLX3 237 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 PMM2O15305 246 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 LRRN2O75325 713 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 RFPL2O75678 378 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 VNN2O95498 520 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 C8AP07357 584 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 FMO5P49326 533 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 TYRO3Q06418 890 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 SKOR2Q2VWA4 1001 aaPredicted RBP29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 LIN9Q5TKA1 542 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 SPOPLQ6IQ16 392 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 TMC5Q6UXY8 1006 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 C11orf57Q6ZUT1 292 aaPredicted RBP29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 LRRTM3Q86VH5 581 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 TCEAL8Q8IYN2 117 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 FEZF2Q8TBJ5 459 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 CNOT6LQ96LI5 555 aaKnown RBP29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 MRPL45Q9BRJ2 306 aaKnown RBP29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 IMPG2Q9BZV3 1241 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 USP15Q9Y4E8 981 aaPredicted RBP29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 C5orf42Q9H799 3197 aa29.97■■■□□ 2.39
SMARCC1-203ENST00000454240 CCDC195A0A1B0GUA6 201 aa29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 LETM1O95202 739 aaPredicted RBP29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 SEC24AO95486 1093 aa29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 ELF1P32519 619 aa29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 ADCY1Q08828 1119 aa29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 CES5AQ6NT32 575 aa29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 CCDC149Q6ZUS6 474 aa29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 GPR149Q86SP6 731 aa29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 RHOBTB2Q9BYZ6 727 aa29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 APOBEC3GQ9HC16 384 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms