RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 RPS6KA5O75582 802 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 SSBP05455 408 aaKnown RBP eCLIP6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 UBTFL1P0CB47 393 aaPredicted RBP6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 SLC11A1P49279 550 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 LRRC14Q15048 493 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 SMAD1Q15797 465 aaKnown RBP6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 TSNAXIP1Q2TAA8 658 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 DIEXFQ68CQ4 756 aaKnown RBP6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 METTL7BQ6UX53 244 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 FAM228AQ86W67 206 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 NME8Q8N427 588 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 MBOAT7Q96N66 472 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 RSRP1Q9BUV0 290 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 BRD9Q9H8M2 597 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 GDE1Q9NZC3 331 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 DNAJB4Q9UDY4 337 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 ZNF215Q9UL58 517 aaPredicted RBP6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 KCNH3Q9ULD8 1083 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 APOBEC2Q9Y235 224 aaKnown RBP6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 THADAQ6YHU6 1953 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 PLIN4Q96Q06 1357 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 VPS13CQ709C8 3753 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 A0A0U1RQF3 1178 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 MYBPHLA2RUH7 354 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 BLACEA4D250 179 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 FAM149AA5PLN7 773 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 C9orf172C9J069 976 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 RRP8O43159 456 aaKnown RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 DEAF1O75398 565 aaPredicted RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 MBD4O95243 580 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 RECKO95980 971 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 NME2P22392 152 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 RPS26P62854 115 aaKnown RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 NRG1Q02297 640 aaPredicted RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 GSTM4Q03013 218 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 SLC14A1Q13336 389 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 RALBP1Q15311 655 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 UTP14CQ5TAP6 766 aaKnown RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 ARHGEF16Q5VV41 709 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 ATG14Q6ZNE5 492 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 CYFIP1Q7L576 1253 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 PALB2Q86YC2 1186 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 SPACA3Q8IXA5 215 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 ABI1Q8IZP0 508 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 TMEM130Q8N3G9 435 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 EXD3Q8N9H8 876 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 SLC7A3Q8WY07 619 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 PIGKQ92643 395 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 KLHDC7BQ96G42 594 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 PDCD2LQ9BRP1 358 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 TRMT61BQ9BVS5 477 aaKnown RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 NUSAP1Q9BXS6 441 aaKnown RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 MRPL18Q9H0U6 180 aaKnown RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 CAPN10Q9HC96 672 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 FSCN3Q9NQT6 498 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 IL17RBQ9NRM6 502 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 CHST7Q9NS84 486 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 STK39Q9UEW8 545 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 PLEKHB1Q9UF11 243 aaPredicted RBP6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 PNMA2Q9UL42 364 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 CYP8B1Q9UNU6 501 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 PCDH15Q96QU1 1955 aa6.04□□□□□ -1.44
SBDSP1-204ENST00000453858 ADAMTS9Q9P2N4 1935 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 PTPRCP08575 1304 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 ZNF862O60290 1169 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 OPHN1O60890 802 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 ATP9AO75110 1047 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 ZC3H11AO75152 810 aaKnown RBP eCLIP6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 PRDM1O75626 825 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 SOD2P04179 222 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 CHGBP05060 677 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 POU2F2P09086 479 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 HNRNPA1P09651 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 INSRRP14616 1297 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 BCKDHBP21953 392 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 ARNTP27540 789 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 CDC25BP30305 580 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 SOX9P48436 509 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 AK2P54819 239 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 GHRHRQ02643 423 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 MAPK6Q16659 721 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 MEI1Q5TIA1 1274 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 STOX1Q6ZVD7 989 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 HS2ST1Q7LGA3 356 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 RELL1Q8IUW5 271 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 KIAA0319LQ8IZA0 1049 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 HDDC3Q8N4P3 179 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 OR2I1PQ8NGU4 316 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 IL31RAQ8NI17 732 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 RNF34Q969K3 372 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 MCRS1Q96EZ8 462 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 KIF2CQ99661 725 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 CORO1BQ9BR76 489 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 MRPL9Q9BYD2 267 aaKnown RBP6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 STARD5Q9NSY2 213 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 TBC1D13Q9NVG8 400 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 HCFC1R1Q9NWW0 138 aa6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 DNMT3BQ9UBC3 853 aaKnown RBP6.03□□□□□ -1.44
SBDSP1-204ENST00000453858 NCANO14594 1321 aa6.02□□□□□ -1.45
SBDSP1-204ENST00000453858 SMIM35A0A1B0GVV1 85 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms