RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 SPOPLQ6IQ16 392 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 SLC8B1Q6J4K2 584 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 LRSAM1Q6UWE0 723 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 EHBP1Q8NDI1 1231 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 OR6B3Q8NGW1 331 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 SLC22A17Q8WUG5 538 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 CASP10Q92851 521 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 PABPC5Q96DU9 382 aaKnown RBP15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 FAXDC2Q96IV6 333 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 NDST4Q9H3R1 872 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 POLIQ9UNA4 740 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 CHD9Q3L8U1 2897 aa15.65■□□□□ 0.1
NCKIPSD-207ENST00000453349 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 GABRDO14764 452 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 CPB1P15086 417 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 WARSP23381 471 aaKnown RBP15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 PCSK1P29120 753 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 ELF1P32519 619 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 SCN1AP35498 2009 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 NOP14P78316 857 aaKnown RBP15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 NCAPHQ15003 741 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 RSPO2Q6UXX9 243 aaPredicted RBP15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 TMEM184AQ6ZMB5 413 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 LIMS2Q7Z4I7 341 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 DHX40Q8IX18 779 aaKnown RBP15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 DCP1BQ8IZD4 617 aaKnown RBP15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 ZNF461Q8TAF7 563 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 HLA-CQ95604 372 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 ELMO3Q96BJ8 720 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 ACBD6Q9BR61 282 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 TSPY26PQ9H489 355 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 HCFC2Q9Y5Z7 792 aa15.64■□□□□ 0.09
NCKIPSD-207ENST00000453349 GOLGA6L19H0YKK7 550 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 LINC01565O15544 149 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 ADAM12O43184 909 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 TGM5O43548 720 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 LRRN2O75325 713 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 CDH8P55286 799 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 TSPY1Q01534 308 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 KCNC3Q14003 757 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 IQCB1Q15051 598 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 CTC1Q2NKJ3 1217 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 TPGS2Q68CL5 300 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 LILRA6Q6PI73 481 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 SCARA5Q6ZMJ2 495 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 GBP6Q6ZN66 633 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 HDAC7Q8WUI4 952 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 TATDN2Q93075 761 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 NT5C1BQ96P26 610 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 MRPL45Q9BRJ2 306 aaKnown RBP15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 DNAI2Q9GZS0 605 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 NIF3L1Q9GZT8 377 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 ZCWPW1Q9H0M4 648 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 VPS16Q9H269 839 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 PLEKHA4Q9H4M7 779 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 CYP3A43Q9HB55 503 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 APOBEC3GQ9HC16 384 aaKnown RBP15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 CBX8Q9HC52 389 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 MAFFQ9ULX9 164 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 COG5Q9UP83 839 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 LAMA3Q16787 3333 aa15.63■□□□□ 0.09
NCKIPSD-207ENST00000453349 VWA8A3KMH1 1905 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 ATG2AQ2TAZ0 1938 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 A8MXQ7 604 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 ABLIM3O94929 683 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 PDGFRBP09619 1106 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 WEE2P0C1S8 567 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 OR4Q2P0C623 313 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 SPATA31D3P0C874 917 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 ATF2P15336 505 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 EPCAMP16422 314 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 TRIM21P19474 475 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 ROR1Q01973 937 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 SMARCB1Q12824 385 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 LRMPQ12912 555 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 GPR17Q13304 367 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 KRT31Q15323 416 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 MIIPQ5JXC2 388 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 SPATA31D4Q6ZUB0 917 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 OSTM1Q86WC4 334 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 TTC39CQ8N584 583 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 KREMEN2Q8NCW0 462 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 KBTBD7Q8WVZ9 684 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 RTP3Q9BQQ7 232 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 BCO2Q9BYV7 579 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 SMYD3Q9H7B4 428 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 DZANK1Q9NVP4 752 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 TAB2Q9NYJ8 693 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 LIMA1Q9UHB6 759 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 CDH9Q9ULB4 789 aa15.62■□□□□ 0.09
NCKIPSD-207ENST00000453349 WDR27A2RRH5 827 aa15.61■□□□□ 0.09
NCKIPSD-207ENST00000453349 GTPBP10A4D1E9 387 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-207ENST00000453349 LRRC10BA6NIK2 292 aa15.61■□□□□ 0.09
NCKIPSD-207ENST00000453349 ZNF18P17022 549 aa15.61■□□□□ 0.09
NCKIPSD-207ENST00000453349 TBXAS1P24557 533 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-207ENST00000453349 ACAT1P24752 427 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-207ENST00000453349 LMO2P25791 158 aa15.61■□□□□ 0.09
NCKIPSD-207ENST00000453349 ASPAP45381 313 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms