RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 FAM102AQ5T9C2 384 aaPredicted RBP11.78□□□□□ -0.52
DDR1-239ENST00000452441 ANKRD20A3Q5VUR7 823 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 IL31Q6EBC2 164 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 EFCAB12Q6NXP0 572 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 VPS52Q8N1B4 723 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 OR6B3Q8NGW1 331 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 TMEM237Q96Q45 408 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 CEP41Q9BYV8 373 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 FAM129AQ9BZQ8 928 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 SLCO1B3Q9NPD5 702 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 DNPEPQ9ULA0 475 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 CFAP69A5D8W1 941 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 RIPK2O43353 540 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 BAG2O95816 211 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 PDHA1P08559 390 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 PDGFRBP09619 1106 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 TARSP26639 723 aaKnown RBP11.78□□□□□ -0.52
DDR1-239ENST00000452441 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 DUPD1Q68J44 220 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 NME8Q8N427 588 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 FAM71DQ8N9W8 422 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 CCNYQ8ND76 341 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 ATL2Q8NHH9 583 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 DTX3LQ8TDB6 740 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 MCUR1Q96AQ8 359 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 GPRASP2Q96D09 838 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 LY75O60449 1722 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 M0QYV0 167 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 ZBTB48P10074 688 aaPredicted RBP11.78□□□□□ -0.52
DDR1-239ENST00000452441 ALDH3A1P30838 453 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 IL9RQ01113 521 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 RNASELQ05823 741 aaKnown RBP11.78□□□□□ -0.52
DDR1-239ENST00000452441 CYP24A1Q07973 514 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 TFDP1Q14186 410 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 ERMARDQ5T6L9 678 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 MFSD7Q6UXD7 560 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 TMEM161BQ8NDZ6 487 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 ERP27Q96DN0 273 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 CPB2Q96IY4 423 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 MRPL4Q9BYD3 311 aaKnown RBP11.78□□□□□ -0.52
DDR1-239ENST00000452441 SLC24A3Q9HC58 644 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 GGA2Q9UJY4 613 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 GTF3C4Q9UKN8 822 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 PCDHB2Q9Y5E7 798 aa11.78□□□□□ -0.52
DDR1-239ENST00000452441 UBE4BO95155 1302 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 FOCADQ5VW36 1801 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 ANXA13P27216 316 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 MAGEA4P43358 317 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 GPC3P51654 580 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 POU5F1Q01860 360 aaKnown RBP11.77□□□□□ -0.52
DDR1-239ENST00000452441 KIZQ2M2Z5 673 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 ASAP3Q8TDY4 903 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 CYTH2Q99418 400 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 SPATC1LQ9H0A9 340 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 POLIQ9UNA4 740 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 MYH11P35749 1972 aa11.77□□□□□ -0.52
DDR1-239ENST00000452441 GTPBP10A4D1E9 387 aaKnown RBP11.77□□□□□ -0.53
DDR1-239ENST00000452441 SRRM3A6NNA2 597 aaPredicted RBP11.77□□□□□ -0.53
DDR1-239ENST00000452441 MSH2P43246 934 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 PRAMEF19Q5SWL8 479 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 TRPM8Q7Z2W7 1104 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 MED10Q9BTT4 135 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 ABT1Q9ULW3 272 aaKnown RBP11.77□□□□□ -0.53
DDR1-239ENST00000452441 ZNF536O15090 1300 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
DDR1-239ENST00000452441 IGF2BP3O00425 579 aaKnown RBP eCLIP11.77□□□□□ -0.533e-6■□□□□ 10.4
DDR1-239ENST00000452441 CST3P01034 146 aaPredicted RBP11.77□□□□□ -0.53
DDR1-239ENST00000452441 CDH6P55285 790 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 FASTKD3Q14CZ7 662 aaKnown RBP11.77□□□□□ -0.53
DDR1-239ENST00000452441 DUOXA2Q1HG44 320 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 PAN2Q504Q3 1202 aaKnown RBP11.77□□□□□ -0.53
DDR1-239ENST00000452441 KDELC2Q7Z4H8 507 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 CCDC110Q8TBZ0 833 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 SMYD2Q9NRG4 433 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 NAALADL1Q9UQQ1 740 aa11.77□□□□□ -0.53
DDR1-239ENST00000452441 ZMYM2Q9UBW7 1377 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 DIAPH2O60879 1101 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
DDR1-239ENST00000452441 INHBAP08476 426 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 KRT3P12035 628 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 HSD17B4P51659 736 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 FKBP1CQ5VVH2 108 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 ARHGEF18Q6ZSZ5 1173 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 C3orf62Q6ZUJ4 267 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 TMEM35BQ8NCS4 154 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 C3orf20Q8ND61 904 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 TLCD1Q96CP7 247 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 GMLQ99445 158 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 ZDHHC18Q9NUE0 388 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDR1-239ENST00000452441 A8MUI8 341 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 LDHAP00338 332 aaKnown RBP11.76□□□□□ -0.53
DDR1-239ENST00000452441 MYL3P08590 195 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 RARBP10826 455 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 PHKA2P46019 1235 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 TTLL4Q14679 1199 aa11.76□□□□□ -0.53
DDR1-239ENST00000452441 HADHQ16836 314 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms