RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 TRIM49BA6NDI0 452 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 ABLIM3O94929 683 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 C4BPAP04003 597 aaKnown RBP21.45■■□□□ 1.02
COL9A3-202ENST00000452372 DLG4P78352 724 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 ROR1Q01973 937 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 BFSP1Q12934 665 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 ATAT1Q5SQI0 421 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 FOXR2Q6PJQ5 311 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 GPR149Q86SP6 731 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 FBXL6Q8N531 539 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 CMASQ8NFW8 434 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-202ENST00000452372 ZNF461Q8TAF7 563 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 GPT2Q8TD30 523 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 HPDLQ96IR7 371 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 RIPOR3Q96MK2 946 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 DENND4AQ7Z401 1863 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 KMT2EQ8IZD2 1858 aa21.45■■□□□ 1.02
COL9A3-202ENST00000452372 WDR27A2RRH5 827 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 SPDYE4A6NLX3 237 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 PAPLNO95428 1278 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 KRT13P13646 458 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 VAMP7P51809 220 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 C1orf220Q5T0J3 134 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 ALYREFQ86V81 257 aaKnown RBP21.44■■□□□ 1.02
COL9A3-202ENST00000452372 METTL23Q86XA0 190 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 PRSS33Q8NF86 280 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 EEF2KMTQ96G04 330 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 SMOC2Q9H3U7 446 aa21.44■■□□□ 1.02
COL9A3-202ENST00000452372 TSC2P49815 1807 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 OR6C75A6NL08 312 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 HUS1O60921 280 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 PDGFBP01127 241 aaPredicted RBP21.43■■□□□ 1.02
COL9A3-202ENST00000452372 ARPP19P56211 112 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 UVSSAQ2YD98 709 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 TDRD10Q5VZ19 366 aaKnown RBP21.43■■□□□ 1.02
COL9A3-202ENST00000452372 WSCD1Q658N2 575 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 TPGS2Q68CL5 300 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 KLHL10Q6JEL2 608 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 ZDHHC14Q8IZN3 488 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 NELFBQ8WX92 580 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 ZDHHC7Q9NXF8 308 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 LIMD1Q9UGP4 676 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 SNX9Q9Y5X1 595 aa21.43■■□□□ 1.02
COL9A3-202ENST00000452372 BICDL2A1A5D9 508 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 SLC16A3O15427 465 aaKnown RBP21.42■■□□□ 1.02
COL9A3-202ENST00000452372 PHACTR2O75167 634 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 RFPL2O75678 378 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 ZMYND10O75800 440 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 STAU1O95793 577 aaKnown RBP21.42■■□□□ 1.02
COL9A3-202ENST00000452372 EPB41P11171 864 aaKnown RBP21.42■■□□□ 1.02
COL9A3-202ENST00000452372 ATICP31939 592 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 VCPP55072 806 aaKnown RBP21.42■■□□□ 1.02
COL9A3-202ENST00000452372 BIRC3Q13489 604 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 TRPC3Q13507 836 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 ZACNQ401N2 412 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 TTI2Q6NXR4 508 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 CYP26C1Q6V0L0 522 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 C15orf39Q6ZRI6 1047 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 RTL10Q7L3V2 364 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 DPH6Q7L8W6 267 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 THEM5Q8N1Q8 247 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 TMEM86AQ8N2M4 240 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 TOP6BLQ8N6T0 577 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 DOCK6Q96HP0 2047 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 DUSP9Q99956 384 aaKnown RBP21.42■■□□□ 1.02
COL9A3-202ENST00000452372 RHOBTB2Q9BYZ6 727 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 MAFFQ9ULX9 164 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 L1RE1Q9UN81 338 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 USTQ9Y2C2 406 aa21.42■■□□□ 1.02
COL9A3-202ENST00000452372 CCDC195A0A1B0GUA6 201 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 ASGR2P07307 311 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 ATF2P15336 505 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 MYL6P60660 151 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 LIN9Q5TKA1 542 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 SV2AQ7L0J3 742 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 LIMS2Q7Z4I7 341 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 PDCL2Q8N4E4 241 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 SPATA18Q8TC71 538 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 CEP63Q96MT8 703 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 RTP3Q9BQQ7 232 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 XYLT2Q9H1B5 865 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 AFF4Q9UHB7 1163 aaKnown RBP21.41■■□□□ 1.02
COL9A3-202ENST00000452372 SORCS3Q9UPU3 1222 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 CTNND2Q9UQB3 1225 aa21.41■■□□□ 1.02
COL9A3-202ENST00000452372 VNN1O95497 513 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 MBD3O95983 291 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 C8AP07357 584 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 CPB1P15086 417 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 AVPR2P30518 371 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 TCF15Q12870 199 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 PAK1Q13153 545 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 GPR17Q13304 367 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 NCOA4Q13772 614 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 SOWAHAQ2M3V2 549 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 CCDC149Q6ZUS6 474 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 FILIP1Q7Z7B0 1213 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 TCEAL8Q8IYN2 117 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 MLKLQ8NB16 471 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 OR10T2Q8NGX3 314 aa21.4■■□□□ 1.02
COL9A3-202ENST00000452372 SYAP1Q96A49 352 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms