RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PGLYRP2Q96PD5 576 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 TSG101Q99816 390 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 CORO1BQ9BR76 489 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 FUCA2Q9BTY2 467 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 KCNH6Q9H252 994 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 DPP3Q9NY33 737 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 MAPK8IP1Q9UQF2 711 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 INSL5Q9Y5Q6 135 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 ANO9A1A5B4 782 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 PPP1R3GB7ZBB8 358 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 ANHXE9PGG2 379 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 OAZ2O95190 189 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 RHOP08100 348 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 POU2F2P09086 479 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 PTPN2P17706 415 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 ERCC5P28715 1186 aaPredicted RBP18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 CDR1P51861 262 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 SNRPFP62306 86 aaKnown RBP18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 CCDC173Q0VFZ6 552 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 PAK1Q13153 545 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 SLC5A9Q2M3M2 681 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 TPGS2Q68CL5 300 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 OVOS1Q6IE37 1185 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 KLHL10Q6JEL2 608 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 RTL10Q7L3V2 364 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 HS2ST1Q7LGA3 356 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 NELFCDQ8IXH7 590 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 SIX5Q8N196 739 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 TMEM105Q8N8V8 129 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 GOLGA5Q8TBA6 731 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 FGF14Q92915 247 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 MCRS1Q96EZ8 462 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 FAM84AQ96KN4 292 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 TMEM209Q96SK2 561 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 CBWD1Q9BRT8 395 aa18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 CGNQ9P2M7 1197 aaKnown RBP18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 AFF4Q9UHB7 1163 aaKnown RBP18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 MRPS23Q9Y3D9 190 aaKnown RBP18.37■□□□□ 0.53
PRPF40A-204ENST00000450303 CALUO43852 315 aaPredicted RBP18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 IL18RAPO95256 599 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 GARTP22102 1010 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 CCNE1P24864 410 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 NHLH1Q02575 133 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 TWF1Q12792 350 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 ANO6Q4KMQ2 910 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 HS6ST3Q8IZP7 471 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 NELFBQ8WX92 580 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 NXPE3Q969Y0 559 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 DNAJC25Q9H1X3 360 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 CA14Q9ULX7 337 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 C2CD2Q9Y426 696 aa18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 ZFP37Q9Y6Q3 630 aaPredicted RBP18.36■□□□□ 0.53
PRPF40A-204ENST00000450303 STK25O00506 426 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 PDXKO00764 312 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 VNN2O95498 520 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 SRFP11831 508 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 ODC1P11926 461 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 NPR3P17342 541 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 TYMPP19971 482 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 TFAMQ00059 246 aaKnown RBP18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 SCARA3Q6AZY7 606 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 ASTLQ6HA08 431 aaPredicted RBP18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 ARMCX5Q6P1M9 558 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 POTEHQ6S545 545 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 BRSK2Q8IWQ3 736 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 NPAS3Q8IXF0 933 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 GPR152Q8TDT2 470 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 TRIM44Q96DX7 344 aaPredicted RBP18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 TCEAL4Q96EI5 215 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 CRISPLD1Q9H336 500 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 RBAKQ9NYW8 714 aaPredicted RBP18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 CEP72Q9P209 647 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 RWDD2AQ9UIY3 292 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 CTNND2Q9UQB3 1225 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 SLC27A5Q9Y2P5 690 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 TSC2P49815 1807 aa18.35■□□□□ 0.53
PRPF40A-204ENST00000450303 KRBA1A5PL33 1030 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 OR6C75A6NL08 312 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 SMTNL1A8MU46 457 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 NRG2O14511 850 aaPredicted RBP18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 CYB561D2O14569 222 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 PI15O43692 258 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 FGFR1OPO95684 399 aaKnown RBP18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 CD44P16070 742 aaKnown RBP18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 CEBPBP17676 345 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 HOXD13P35453 343 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 TAF6P49848 677 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 POU5F1Q01860 360 aaKnown RBP18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 LRRC63Q05C16 580 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 TCF15Q12870 199 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 DUSP4Q13115 394 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 TPD52L1Q16890 204 aaPredicted RBP18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 CWF19L1Q69YN2 538 aaKnown RBP18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 CENPPQ6IPU0 288 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 FOXR2Q6PJQ5 311 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 ZNF512Q96ME7 567 aaPredicted RBP18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 KXD1Q9BQD3 176 aa18.34■□□□□ 0.53
PRPF40A-204ENST00000450303 EXTL3O43909 919 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms