RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
SPTLC3-204ENST00000450297 RPF1Q9H9Y2 349 aaKnown RBP10.49□□□□□ -0.73
SPTLC3-204ENST00000450297 GTSE1Q9NYZ3 720 aa10.49□□□□□ -0.73
SPTLC3-204ENST00000450297 ASB3Q9Y575 518 aa10.49□□□□□ -0.73
SPTLC3-204ENST00000450297 PCDHGA4Q9Y5G9 962 aa10.49□□□□□ -0.73
SPTLC3-204ENST00000450297 DOCK6Q96HP0 2047 aa10.49□□□□□ -0.73
SPTLC3-204ENST00000450297 NCANO14594 1321 aa10.49□□□□□ -0.73
SPTLC3-204ENST00000450297 FRYLO94915 3013 aa10.49□□□□□ -0.73
SPTLC3-204ENST00000450297 NPHP3-ACAD11A0A0J9YXS1 232 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 LACTBL1A8MY62 500 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 H0YCG3 227 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 ARNTLO00327 626 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 LAD1O00515 517 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 HNRNPDLO14979 420 aaKnown RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 GDF9O60383 454 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 FOXD2O60548 495 aaPredicted RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 KRT18P05783 430 aaKnown RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 ODC1P11926 461 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 LRPAP1P30533 357 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 TNFSF9P41273 254 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 PXNP49023 591 aaPredicted RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 MLLT6P55198 1093 aaPredicted RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 CYP4F8P98187 520 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 MCL1Q07820 350 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 TNK2Q07912 1038 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 FCHO2Q0JRZ9 810 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 DHX8Q14562 1220 aaKnown RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 PTPAQ15257 358 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 CCDC6Q16204 474 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 KYAT1Q16773 422 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 MGAT5BQ3V5L5 792 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 TXNDC11Q6PKC3 985 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 METTL23Q86XA0 190 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 TMC8Q8IU68 726 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 TTC16Q8NEE8 873 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 BEST2Q8NFU1 509 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 DDX1Q92499 740 aaKnown RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 ZSCAN31Q96LW9 406 aaPredicted RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 NTPCRQ9BSD7 190 aaKnown RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 LRRC3Q9BY71 257 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 SMG9Q9H0W8 520 aaKnown RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 DNAJC25Q9H1X3 360 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 CRISPLD1Q9H336 500 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 ZHX3Q9H4I2 956 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 SLC8A2Q9UPR5 921 aa10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.48□□□□□ -0.73
SPTLC3-204ENST00000450297 VWA8A3KMH1 1905 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 TTC26A0AVF1 554 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 MYBPHLA2RUH7 354 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 MTMR11A4FU01 709 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 K7ESF4 209 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 VNN2O95498 520 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 NUDT7P0C024 238 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 CCDC192P0DO97 292 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 TYMPP19971 482 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 CYP3A5P20815 502 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 PRPHP41219 470 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 TUFMP49411 452 aaKnown RBP10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 TOB1P50616 345 aaPredicted RBP10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 GRSF1Q12849 480 aaKnown RBP eCLIP10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 MYBPC2Q14324 1141 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 IL17AQ16552 155 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 ITPRIPL2Q3MIP1 535 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 SLC39A12Q504Y0 691 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 GAREM2Q75VX8 874 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 THEM5Q8N1Q8 247 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 MYCT1Q8N699 235 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 TTC9BQ8N6N2 239 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 RASSF8Q8NHQ8 419 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 BPIFB1Q8TDL5 484 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 GIPC2Q8TF65 315 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 PSMG2Q969U7 264 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 SENP8Q96LD8 212 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 TMEM209Q96SK2 561 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 LPIN3Q9BQK8 851 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 MSTO1Q9BUK6 570 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 ARRDC1-AS1Q9H2J1 176 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 TASP1Q9H6P5 420 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 C2orf42Q9NWW7 574 aa10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 LARSQ9P2J5 1176 aaKnown RBP10.47□□□□□ -0.73
SPTLC3-204ENST00000450297 VWA3AA6NCI4 1184 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 K7ENM7 598 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 PPEF2O14830 753 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 EXTL3O43909 919 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 ATG13O75143 517 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 RPP40O75818 363 aaKnown RBP10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 FAM13AO94988 1023 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 PRAMEF12O95522 483 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 U2AF2P26368 475 aaKnown RBP eCLIP10.46□□□□□ -0.735e-7■□□□□ 10.7
SPTLC3-204ENST00000450297 CDC25CP30307 473 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 HOXC13P31276 330 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 AVPR1AP37288 418 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 MCM2P49736 904 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 LILRA4P59901 499 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 BFSP1Q12934 665 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 SF3A2Q15428 464 aaKnown RBP10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 ZBTB6Q15916 424 aa10.46□□□□□ -0.73
SPTLC3-204ENST00000450297 ENOX2Q16206 610 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms