RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DNAAF3Q8N9W5 541 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 ADA2Q9NZK5 511 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 AK5Q9Y6K8 562 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 ATXN2Q99700 1313 aaKnown RBP13.02□□□□□ -0.33
UBE3B-204ENST00000449510 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.33
UBE3B-204ENST00000449510 INO80B-WBP1J3KQ70 363 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 HSPA4LO95757 839 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 ACADSP16219 412 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 DSG1Q02413 1049 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 HSP90AA5PQ58FG0 334 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 ALYREFQ86V81 257 aaKnown RBP13.02□□□□□ -0.33
UBE3B-204ENST00000449510 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 ART4Q93070 314 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 TMEM143Q96AN5 459 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 FAM149B1Q96BN6 582 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 GCNAQ96QF7 691 aa13.02□□□□□ -0.33
UBE3B-204ENST00000449510 INO80BQ9C086 356 aaPredicted RBP13.02□□□□□ -0.33
UBE3B-204ENST00000449510 GPR75-ASB3A0A0A6YYF3 556 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 PYGLP06737 847 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 POLR2BP30876 1174 aaKnown RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 ZNF200P98182 395 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SLC25A3Q00325 362 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 STX3Q13277 289 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 ARHGAP27Q6ZUM4 889 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 EIF1ADQ8N9N8 165 aaKnown RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SPATA18Q8TC71 538 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 ACTL9Q8TC94 416 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 FERMT1Q9BQL6 677 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 UNC45AQ9H3U1 944 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 NOL3O60936 208 aaKnown RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 TPBGLP0DKB5 382 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 WDR4P57081 412 aaKnown RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 RIPK1Q13546 671 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 KCTD21Q4G0X4 260 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 ANO7Q6IWH7 933 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 E2F7Q96AV8 911 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 WWP1Q9H0M0 922 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 EBF2Q9HAK2 575 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 ZC3H7BQ9UGR2 993 aaKnown RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 TMEM59LQ9UK28 342 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 GOLGA8QA0A0J9YX86 632 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 GOLGA8OA6NCC3 632 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SRRM3A6NNA2 597 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 GOLGA8NF8WBI6 632 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 KCNN4O15554 427 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 PSMG1O95456 288 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SPATA31C1P0DKV0 1188 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SP100P23497 879 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 ANXA13P27216 316 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 ROR2Q01974 943 aaKnown RBP13.01□□□□□ -0.33
UBE3B-204ENST00000449510 POLNQ7Z5Q5 900 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 CCNYL1Q8N7R7 359 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 ACER1Q8TDN7 264 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SENP1Q9P0U3 644 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 PCYOX1Q9UHG3 505 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 NARFQ9UHQ1 456 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 SCINQ9Y6U3 715 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
UBE3B-204ENST00000449510 F8VP50 259 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 SETSIPP0DME0 302 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 NELFEP18615 380 aaKnown RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 EEF1B2P24534 225 aaKnown RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 YARSP54577 528 aaKnown RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 TMEM35BQ8NCS4 154 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 TBC1D16Q8TBP0 767 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 NLRP7Q8WX94 980 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 AGAP3Q96P47 875 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 ZNF184Q99676 751 aaPredicted RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 IVNS1ABPQ9Y6Y0 642 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 HLA-DRAP01903 254 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 OTUD4Q01804 1114 aaKnown RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 MCL1Q07820 350 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 PDCD2Q16342 344 aaPredicted RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 CXorf38Q8TB03 319 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 TMA16Q96EY4 203 aaKnown RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 AGBL1Q96MI9 1066 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 RMDN3Q96TC7 470 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 ZBBXA8MT70 800 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 KRT38O76015 456 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 GTF2H1P32780 548 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 MMP14P50281 582 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 HIRAP54198 1017 aaPredicted RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 FAAP100Q0VG06 881 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 ANO4Q32M45 955 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 LAYNQ6UX15 382 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 TMEM179Q6ZVK1 233 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 SULF1Q8IWU6 871 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 HEXIM2Q96MH2 286 aaKnown RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 ARHGEF3Q9NR81 526 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms