RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 NCANO14594 1321 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 CCDC196A0A1B0GTZ2 297 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 SLC38A8A6NNN8 435 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 PRRG1O14668 218 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 PTGESO14684 152 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 ADAMTS3O15072 1205 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 HYAL3O43820 417 aaPredicted RBP8.07□□□□□ -1.12
RBM39-218ENST00000449489 HOXC13P31276 330 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 ROR1Q01973 937 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 CREB5Q02930 508 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 PPP2R5CQ13362 524 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 MRPL58Q14197 206 aaKnown RBP8.07□□□□□ -1.12
RBM39-218ENST00000449489 EMC2Q15006 297 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 HAUS6Q7Z4H7 955 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 PIP4P1Q86T03 277 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 RAB11FIP4Q86YS3 637 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 SNIP1Q8TAD8 396 aaKnown RBP8.07□□□□□ -1.12
RBM39-218ENST00000449489 ETNPPLQ8TBG4 499 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 STK32AQ8WU08 396 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 UROC1Q96N76 676 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 TMEM209Q96SK2 561 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 KLK14Q9P0G3 267 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 KLK13Q9UKR3 277 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 TPCN1Q9ULQ1 816 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 PCDHGA11Q9Y5H2 935 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 INSL5Q9Y5Q6 135 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 KNL1Q8NG31 2342 aa8.07□□□□□ -1.12
RBM39-218ENST00000449489 NUP210Q8TEM1 1887 aaPredicted RBP8.06□□□□□ -1.12
RBM39-218ENST00000449489 EIF4E1BA6NMX2 242 aaKnown RBP8.06□□□□□ -1.12
RBM39-218ENST00000449489 TRDMT1O14717 391 aaKnown RBP8.06□□□□□ -1.12
RBM39-218ENST00000449489 B3GAT3O94766 335 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 NPTXRO95502 500 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 SOX9P48436 509 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 LMAN2Q12907 356 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 HNRNPDQ14103 355 aaKnown RBP8.06□□□□□ -1.12
RBM39-218ENST00000449489 PON2Q15165 354 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 FAM187BQ17R55 369 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 ZNF423Q2M1K9 1284 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 TMEM196Q5HYL7 178 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 PMS2CLQ68D20 193 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 CD300LGQ6UXG3 332 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 DEFB124Q8NES8 71 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 CCDC148Q8NFR7 591 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 TPCN2Q8NHX9 752 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 RSPRY1Q96DX4 576 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 BBC3Q96PG8 261 aaPredicted RBP8.06□□□□□ -1.12
RBM39-218ENST00000449489 CYP4F11Q9HBI6 524 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 ASAH2Q9NR71 780 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 CACNG4Q9UBN1 327 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 AFF4Q9UHB7 1163 aaKnown RBP8.06□□□□□ -1.12
RBM39-218ENST00000449489 CABIN1Q9Y6J0 2220 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 SHROOM3Q8TF72 1996 aa8.06□□□□□ -1.12
RBM39-218ENST00000449489 SPTAN1Q13813 2472 aaKnown RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 KIF26AQ9ULI4 1882 aaPredicted RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 H7C4K7 107 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 EML1O00423 815 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 SYN3O14994 580 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 PRPF3O43395 683 aaKnown RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 ZIC2O95409 532 aaPredicted RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 SEC24AO95486 1093 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 GSPT1P15170 499 aaKnown RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 TKTP29401 623 aaKnown RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 CDC27P30260 824 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 YWHABP31946 246 aaKnown RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 ARL2P36404 184 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 PXNP49023 591 aaPredicted RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 EXOSC10Q01780 885 aaKnown RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 C19orf57Q0VDD7 668 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 GRSF1Q12849 480 aaKnown RBP eCLIP8.05□□□□□ -1.12
RBM39-218ENST00000449489 SEMA3BQ13214 749 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 CAPSQ13938 189 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 UPP1Q16831 310 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 COL28A1Q2UY09 1125 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 ITPRIPL2Q3MIP1 535 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 FBXO43Q4G163 708 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 PPP1R26Q5T8A7 1209 aaPredicted RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 TTC22Q5TAA0 569 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 PKN3Q6P5Z2 889 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 SYT13Q7L8C5 426 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 RAB44Q7Z6P3 723 aaPredicted RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 ARID3BQ8IVW6 561 aaPredicted RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 SHKBP1Q8TBC3 707 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 TBCKQ8TEA7 893 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 GJA10Q969M2 543 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 FAM20AQ96MK3 541 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 PPP1R10Q96QC0 940 aaKnown RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 LRRC3Q9BY71 257 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 LRRC2Q9BYS8 371 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 FZD8Q9H461 694 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 XPNPEP1Q9NQW7 623 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 SH3GLB2Q9NR46 395 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 PRMT7Q9NVM4 692 aaPredicted RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 GTSE1Q9NYZ3 720 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 CEP72Q9P209 647 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 WRAP73Q9P2S5 460 aaPredicted RBP8.05□□□□□ -1.12
RBM39-218ENST00000449489 DKK4Q9UBT3 224 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 ARID2Q68CP9 1835 aa8.05□□□□□ -1.12
RBM39-218ENST00000449489 PLXNB3Q9ULL4 1909 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 CCDC194A0A1B0GVG4 234 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms