RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 RUNX3Q13761 415 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 UAP1L1Q3KQV9 507 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 USP39Q53GS9 565 aaKnown RBP7.75□□□□□ -1.17
LRRC28-203ENST00000447360 GPR158Q5T848 1215 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 ATF7IP2Q5U623 682 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 EEF1DP3Q658K8 133 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 GAREM2Q75VX8 874 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 MAEAQ7L5Y9 396 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 DNAJB7Q7Z6W7 309 aaPredicted RBP7.75□□□□□ -1.17
LRRC28-203ENST00000447360 PIP4P1Q86T03 277 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 PLPP6Q8IY26 295 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 DDX12PQ92771 950 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 PSMG2Q969U7 264 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 ACDQ96AP0 544 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 HHIPQ96QV1 700 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 FAM83CQ9BQN1 747 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 ATXN3LQ9H3M9 355 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 TASP1Q9H6P5 420 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 NCOA5Q9HCD5 579 aaKnown RBP7.75□□□□□ -1.17
LRRC28-203ENST00000447360 GKN1Q9NS71 199 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 ZMYM5Q9UJ78 669 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 CACNA1EQ15878 2313 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 PATE3B3GLJ2 98 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 EPB41L2O43491 1005 aaKnown RBP7.74□□□□□ -1.17
LRRC28-203ENST00000447360 VNN2O95498 520 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 PRAMEF12O95522 483 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 EGFP01133 1207 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 EDN1P05305 212 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 GABRR2P28476 465 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 MARCKSP29966 332 aaPredicted RBP7.74□□□□□ -1.17
LRRC28-203ENST00000447360 MCM4P33991 863 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 GRM5P41594 1212 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 DGKEP52429 567 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 YWHAHQ04917 246 aaPredicted RBP7.74□□□□□ -1.17
LRRC28-203ENST00000447360 SEMA3BQ13214 749 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 GPR17Q13304 367 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 DMC1Q14565 340 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 PPP2R5AQ15172 486 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 BLOC1S2Q6QNY1 142 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 C19orf48Q6RUI8 117 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 ITIH5Q86UX2 942 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 CCDC26Q8TAB7 109 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 DEPTORQ8TB45 409 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 CHFRQ96EP1 664 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 ZMAT2Q96NC0 199 aaKnown RBP7.74□□□□□ -1.17
LRRC28-203ENST00000447360 TBC1D32Q96NH3 1257 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 CCDC94Q9BW85 323 aaPredicted RBP7.74□□□□□ -1.17
LRRC28-203ENST00000447360 NUSAP1Q9BXS6 441 aaKnown RBP7.74□□□□□ -1.17
LRRC28-203ENST00000447360 HPS4Q9NQG7 708 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 POLR3BQ9NW08 1133 aaPredicted RBP7.74□□□□□ -1.17
LRRC28-203ENST00000447360 CNTN3Q9P232 1028 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 HSFX1Q9UBD0 423 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 TNFSF13BQ9Y275 285 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 USP20Q9Y2K6 914 aa7.74□□□□□ -1.17
LRRC28-203ENST00000447360 OTOL1A6NHN0 477 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-203ENST00000447360 OR6C75A6NL08 312 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 EIF4E1BA6NMX2 242 aaKnown RBP7.73□□□□□ -1.17
LRRC28-203ENST00000447360 M0QZQ0 153 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 CPLX1O14810 134 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 REC8O95072 547 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 XBP1P17861 261 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 LIG1P18858 919 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 CYP11B2P19099 503 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 RPS6KB1P23443 525 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 CDC25CP30307 473 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 DPP6P42658 865 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 GALK1P51570 392 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 HNRNPDQ14103 355 aaKnown RBP7.73□□□□□ -1.17
LRRC28-203ENST00000447360 ZNF423Q2M1K9 1284 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 COL28A1Q2UY09 1125 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 TRIM61Q5EBN2 209 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 SPDYCQ5MJ68 293 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 NT5DC1Q5TFE4 455 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 CENPPQ6IPU0 288 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 CPLX2Q6PUV4 134 aaKnown RBP7.73□□□□□ -1.17
LRRC28-203ENST00000447360 PIK3AP1Q6ZUJ8 805 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 RAB44Q7Z6P3 723 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-203ENST00000447360 RASSF3Q86WH2 238 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 CMTM8Q8IZV2 173 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 RPLP0P6Q8NHW5 317 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 BSNDQ8WZ55 320 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 PIGKQ92643 395 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 JAKMIP1Q96N16 626 aaKnown RBP7.73□□□□□ -1.17
LRRC28-203ENST00000447360 AIFM3Q96NN9 605 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 PGLYRP2Q96PD5 576 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 NACC1Q96RE7 527 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 P2RY13Q9BPV8 354 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 EBF3Q9H4W6 596 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 TTC12Q9H892 705 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-203ENST00000447360 ZSWIM6Q9HCJ5 1215 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 FBRSL1Q9HCM7 1045 aaKnown RBP7.73□□□□□ -1.17
LRRC28-203ENST00000447360 TBX20Q9UMR3 447 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 KCNJ14Q9UNX9 436 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 PCNX2A6NKB5 2137 aa7.73□□□□□ -1.17
LRRC28-203ENST00000447360 NAV2Q8IVL1 2488 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 ACACAQ13085 2346 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 A0A087WWV3 80 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SPAARA0A1B0GVQ0 90 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms