RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 GPRASP2Q96D09 838 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 SLCO1B3Q9NPD5 702 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 FETUBQ9UGM5 382 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 KCNG1Q9UIX4 513 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 PTPRJQ12913 1337 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 LIN7AO14910 233 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 MMP8P22894 467 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 NLRP11P59045 1033 aaKnown RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 ATP13A4Q4VNC1 1196 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 ZC3H12AQ5D1E8 599 aaKnown RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 ARHGEF16Q5VV41 709 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 MFSD7Q6UXD7 560 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 CENPUQ71F23 418 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 RBBP8NLQ8NC74 664 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 NKD2Q969F2 451 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 PHACTR1Q9C0D0 580 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 KIF9Q9HAQ2 790 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 CYLDQ9NQC7 956 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 PSMC3IPQ9P2W1 217 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 E7ENQ6 273 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 TRAFD1O14545 582 aaPredicted RBP20.14■□□□□ 0.81
SDCBP-204ENST00000447182 ITGAVP06756 1048 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 ZSCAN5DPP0CG00 497 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 VCPP55072 806 aaKnown RBP20.14■□□□□ 0.81
SDCBP-204ENST00000447182 KAZNQ674X7 775 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 KIRREL3Q8IZU9 778 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 FAXDC2Q96IV6 333 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 VPS37BQ9H9H4 285 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 PCDH9Q9HC56 1237 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 AGO2Q9UKV8 859 aaKnown RBP20.14■□□□□ 0.81
SDCBP-204ENST00000447182 PI4K2BG5E9Z4 385 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 ATP2A1O14983 1001 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 ZBED4O75132 1171 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 KRT1P04264 644 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 T-ENOLP0DO92 83 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 CA4P22748 312 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 RASSF2P50749 326 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 RPL7AP62424 266 aaKnown RBP20.14■□□□□ 0.81
SDCBP-204ENST00000447182 SLC1A5Q15758 541 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 EFHC2Q5JST6 749 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 SPOCD1Q6ZMY3 1216 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 VSIG10LQ86VR7 867 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 SLC7A6OSQ96CW6 309 aaPredicted RBP20.14■□□□□ 0.81
SDCBP-204ENST00000447182 KIAA1683Q9H0B3 1180 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 RNPEPL1Q9HAU8 725 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 CYP26B1Q9NR63 512 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 KLHL11Q9NVR0 708 aa20.14■□□□□ 0.81
SDCBP-204ENST00000447182 TCF4P15884 667 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 ATF7P17544 494 aaPredicted RBP20.13■□□□□ 0.81
SDCBP-204ENST00000447182 GNAZP19086 355 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 TARSP26639 723 aaKnown RBP20.13■□□□□ 0.81
SDCBP-204ENST00000447182 CHRNA5P30532 468 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 WDR72Q3MJ13 1102 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 KRT27Q7Z3Y8 459 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 ZBED8Q8IZ13 594 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 C4orf33Q8N1A6 199 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 ZNF398Q8TD17 642 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 TRIM6Q9C030 488 aaPredicted RBP20.13■□□□□ 0.81
SDCBP-204ENST00000447182 POLR3FQ9H1D9 316 aaPredicted RBP20.13■□□□□ 0.81
SDCBP-204ENST00000447182 HAO1Q9UJM8 370 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 RPL26L1Q9UNX3 145 aaKnown RBP20.13■□□□□ 0.81
SDCBP-204ENST00000447182 IVNS1ABPQ9Y6Y0 642 aa20.13■□□□□ 0.81
SDCBP-204ENST00000447182 hCG_1818297A0A087WSY0 165 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 TCRBV5S1A1TA0A578 114 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 ZWINTO95229 277 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 PIGRP01833 764 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 PSAPP07602 524 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 ETS1P14921 441 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 CALB2P22676 271 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 CCND2P30279 289 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 ZNF132P52740 706 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 ZNF252P-AS1Q0IIN9 211 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 SLC45A4Q5BKX6 768 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 LUC7L3O95232 432 aaKnown RBP20.12■□□□□ 0.81
SDCBP-204ENST00000447182 CALB1P05937 261 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 KCNA2P16389 499 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 ACOT2P49753 483 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 NOP14P78316 857 aaKnown RBP20.12■□□□□ 0.81
SDCBP-204ENST00000447182 TFDP3Q5H9I0 405 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 HHATQ5VTY9 493 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 SH3TC2Q8TF17 1288 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 ZNF606Q8WXB4 792 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 CGRRF1Q99675 332 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 DDX56Q9NY93 547 aaKnown RBP20.12■□□□□ 0.81
SDCBP-204ENST00000447182 CYP39A1Q9NYL5 469 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 ZNF541Q9H0D2 1346 aa20.12■□□□□ 0.81
SDCBP-204ENST00000447182 KIAA1217Q5T5P2 1943 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 C2CD2LO14523 706 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 PEX11AO75192 247 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 LDHAP00338 332 aaKnown RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 PAX7P23759 505 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 GEMIN4P57678 1058 aaKnown RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 PDIA2Q13087 525 aaKnown RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 WASHC2DQ5SRD0 308 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 SLFN12LQ6IEE8 588 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 SWSAP1Q6NVH7 229 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 PCGF5Q86SE9 256 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 UBR7Q8N806 425 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 FAM13CQ8NE31 585 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms