RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 SPATA4Q8NEY3 305 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 SPATA18Q8TC71 538 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 PPP1R2P1Q96PQ5 205 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 ELAC2Q9BQ52 826 aaKnown RBP18.67■□□□□ 0.58
ATG9A-215ENST00000446716 KRT82Q9NSB4 513 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 L3MBTL1Q9Y468 752 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.67■□□□□ 0.58
ATG9A-215ENST00000446716 MGEA5O60502 916 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 TLR2O60603 784 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 TMEM253P0C7T8 217 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 KITP10721 976 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 PPIL2Q13356 520 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 ZNF177Q13360 481 aaPredicted RBP18.67■□□□□ 0.58
ATG9A-215ENST00000446716 SMTNL2Q2TAL5 461 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 UCMAQ8WVF2 138 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 TRPM5Q9NZQ8 1165 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 KIAA1257Q9ULG3 409 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 M0QYT0 321 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 GIT2Q14161 759 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 UGP2Q16851 508 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 GJB7Q6PEY0 223 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 SYDE1Q6ZW31 735 aaPredicted RBP18.67■□□□□ 0.58
ATG9A-215ENST00000446716 SCFD1Q8WVM8 642 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 KCNA2P16389 499 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 DNAJB2P25686 324 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 CNTN2Q02246 1040 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 ADCK2Q7Z695 626 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 VWDEQ8N2E2 1590 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 CYTH2Q99418 400 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 GPR63Q9BZJ6 419 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 WDCPQ9H6R7 721 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 MLXIPLQ9NP71 852 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 IL17RBQ9NRM6 502 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 SNX12Q9UMY4 172 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 PRPF4O43172 522 aaKnown RBP eCLIP18.67■□□□□ 0.582e-7■■■□□ 18.8
ATG9A-215ENST00000446716 CST8O60676 142 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 GHRP10912 638 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 RFC1P35251 1148 aaPredicted RBP18.67■□□□□ 0.58
ATG9A-215ENST00000446716 MAGOHP61326 146 aaKnown RBP18.67■□□□□ 0.58
ATG9A-215ENST00000446716 ORC1Q13415 861 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 PDAP1Q13442 181 aaKnown RBP18.67■□□□□ 0.58
ATG9A-215ENST00000446716 ACVR2BQ13705 512 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 MFSD10Q14728 455 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 RBBP7Q16576 425 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 ZFPM1Q8IX07 1006 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 DPP7Q9UHL4 492 aa18.67■□□□□ 0.58
ATG9A-215ENST00000446716 TMEM131LA2VDJ0 1609 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 BOLA3Q53S33 107 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 REPS2Q8NFH8 660 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 IPMKQ8NFU5 416 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 TTLL13PA6NNM8 815 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 MTSS1O43312 755 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 VDRP11473 427 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 COMTP21964 271 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 TBCCQ15814 346 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 SLC25A41Q8N5S1 370 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 PTPRN2Q92932 1015 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 SLC4A9Q96Q91 983 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 CGRRF1Q99675 332 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 KANSL3Q9P2N6 904 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 TRIM33Q9UPN9 1127 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 TBKBP1A7MCY6 615 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 DIAPH2O60879 1101 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 DCTN3O75935 186 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 DEFB115Q30KQ5 88 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 DDX27Q96GQ7 796 aaKnown RBP18.66■□□□□ 0.58
ATG9A-215ENST00000446716 FGFR1OP2Q9NVK5 253 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 ARHGEF38Q9NXL2 777 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 RBP3P10745 1247 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 RAB27AP51159 221 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 NFE2Q16621 373 aaPredicted RBP18.66■□□□□ 0.58
ATG9A-215ENST00000446716 DDIASQ8IXT1 998 aa18.66■□□□□ 0.58
ATG9A-215ENST00000446716 ZC3H7BQ9UGR2 993 aaKnown RBP18.66■□□□□ 0.58
ATG9A-215ENST00000446716 AK9Q5TCS8 1911 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 CASTOR2A6NHX0 329 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 SLC8A1P32418 973 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 MDM2Q00987 491 aaPredicted RBP18.65■□□□□ 0.58
ATG9A-215ENST00000446716 BYSLQ13895 437 aaKnown RBP18.65■□□□□ 0.58
ATG9A-215ENST00000446716 FSCN1Q16658 493 aaKnown RBP18.65■□□□□ 0.58
ATG9A-215ENST00000446716 ZBTB41Q5SVQ8 909 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 FBXO38Q6PIJ6 1188 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 CASP4P49662 377 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 BTG3Q14201 252 aaPredicted RBP18.65■□□□□ 0.58
ATG9A-215ENST00000446716 TMCO4Q5TGY1 634 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 TRIM15Q9C019 465 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 LRRC4BQ9NT99 713 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 PCDHGB4Q9UN71 923 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 REREQ9P2R6 1566 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 PPP1R3GB7ZBB8 358 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 PHEXP78562 749 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 TRIM45Q9H8W5 580 aaPredicted RBP18.65■□□□□ 0.58
ATG9A-215ENST00000446716 PAK5Q9P286 719 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 SPECC1L-ADORA2AF8WAN1 911 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 FBXW4P57775 412 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 ZC3H15Q8WU90 426 aaKnown RBP18.65■□□□□ 0.58
ATG9A-215ENST00000446716 CYFIP2Q96F07 1278 aa18.65■□□□□ 0.58
ATG9A-215ENST00000446716 A1CFQ9NQ94 594 aaKnown RBP18.65■□□□□ 0.58
ATG9A-215ENST00000446716 POLR1AO95602 1720 aaPredicted RBP18.64■□□□□ 0.58
ATG9A-215ENST00000446716 USP27XA6NNY8 438 aa18.64■□□□□ 0.58
ATG9A-215ENST00000446716 F5H5T6 163 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms