RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 UROC1Q96N76 676 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 MAD2L2Q9UI95 211 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 FBXO2Q9UK22 296 aaPredicted RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 CAPN7Q9Y6W3 813 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 MYPNQ86TC9 1320 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 CNTNAP5Q8WYK1 1306 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 FNTAP49354 379 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 GEMP55040 296 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 SAMD7Q7Z3H4 446 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 METTL3Q86U44 580 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 XPO6Q96QU8 1125 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 XAB2Q9HCS7 855 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 RIC8BQ9NVN3 520 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 ACSL3O95573 720 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 STIP1P31948 543 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 DSG3P32926 999 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 GRK3P35626 688 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 TUFMP49411 452 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 HPCAP84074 193 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 TWF1Q12792 350 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 NUDCD3Q8IVD9 361 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 C4orf19Q8IY42 314 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 WDCPQ9H6R7 721 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 CASS4Q9NQ75 786 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 ABCF3Q9NUQ8 709 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 FIS1Q9Y3D6 152 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 PHF20L1A8MW92 1017 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 HLA-DRAP01903 254 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 TMEM199Q8N511 208 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 UHMK1Q8TAS1 419 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 APBB2Q92870 758 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 PTPRN2Q92932 1015 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 FBXO32Q969P5 355 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 GOLPH3Q9H4A6 298 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 RAD18Q9NS91 495 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 TBK1Q9UHD2 729 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 A0A087WZ62 844 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 B3GAT3O94766 335 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 FGF19O95750 216 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 NNTQ13423 1086 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 CMTM5Q96DZ9 223 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 DRG1Q9Y295 367 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 ZNF839A8K0R7 811 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PSTPIP1O43586 416 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 ATP1A1P05023 1023 aaKnown RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 AASDHQ4L235 1098 aaPredicted RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PPM1NQ8N819 430 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 RNF25Q96BH1 459 aaPredicted RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 BTBD6Q96KE9 485 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PXMP2Q9NR77 195 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 TMEM39AQ9NV64 488 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 MPP6Q9NZW5 540 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 UMODL1Q5DID0 1318 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 CXCR5P32302 372 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 ARSEP51690 589 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 HERVK_113P62684 666 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 CCDC149Q6ZUS6 474 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PCYOX1LQ8NBM8 494 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 NAF1Q96HR8 494 aaKnown RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 AP1M1Q9BXS5 423 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 CAND2O75155 1236 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 NPM3O75607 178 aaKnown RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 HADHAP40939 763 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 ACOT2P49753 483 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PDCLQ13371 301 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 NBPF9Q3BBW0 867 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 SLC45A4Q5BKX6 768 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 MRNIPQ6NTE8 343 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 NCKAP1Q9Y2A7 1128 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 FAM32AQ9Y421 112 aaKnown RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 UBE2Q2LH0YL09 131 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 CLASP2O75122 1294 aaKnown RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 SPAG7O75391 227 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 RPN2P04844 631 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 RANBP1P43487 201 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PRMT2P55345 433 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 GOLGA7BQ2TAP0 167 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 ZNF284Q2VY69 593 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 LRRC8BQ6P9F7 803 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 WDR49Q8IV35 697 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 DHX40Q8IX18 779 aaKnown RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 TMC2Q8TDI7 906 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 OXER1Q8TDS5 423 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 ATP8B4Q8TF62 1192 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 VPS50Q96JG6 964 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PLA2G4CQ9UP65 541 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 NCAM1P13591 858 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 VCAM1P19320 739 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 IL10P22301 178 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 AVPR1AP37288 418 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PLA2G4FQ68DD2 849 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 CES5AQ6NT32 575 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 CEP19Q96LK0 163 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 WWP1Q9H0M0 922 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PDE11AQ9HCR9 933 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PDIA2Q13087 525 aaKnown RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 DDX42Q86XP3 938 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 FAM163AQ96GL9 167 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms