RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 WDR59Q6PJI9 974 aa16.15■□□□□ 0.18
CCNE1-203ENST00000444983 OR8K1Q8NGG5 319 aa16.15■□□□□ 0.18
CCNE1-203ENST00000444983 PBX4Q9BYU1 374 aa16.15■□□□□ 0.18
CCNE1-203ENST00000444983 NUCKS1Q9H1E3 243 aaKnown RBP16.15■□□□□ 0.18
CCNE1-203ENST00000444983 CHST7Q9NS84 486 aa16.15■□□□□ 0.18
CCNE1-203ENST00000444983 ABHD10Q9NUJ1 306 aa16.15■□□□□ 0.18
CCNE1-203ENST00000444983 SPG21Q9NZD8 308 aa16.15■□□□□ 0.18
CCNE1-203ENST00000444983 BARX2Q9UMQ3 279 aaPredicted RBP16.15■□□□□ 0.18
CCNE1-203ENST00000444983 STXBP5LQ9Y2K9 1186 aa16.15■□□□□ 0.18
CCNE1-203ENST00000444983 YBX2Q9Y2T7 364 aaKnown RBP16.15■□□□□ 0.18
CCNE1-203ENST00000444983 SF3B1O75533 1304 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCNE1-203ENST00000444983 C5orf67F2Z3F1 127 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 OAZ2O95190 189 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 CA3P07451 260 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 ODC1P11926 461 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 CD58P19256 250 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 LMO2P25791 158 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 PPM1AP35813 382 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 BMPR1AP36894 532 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 PBX2P40425 430 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 STAT1P42224 750 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 YWHAEP62258 255 aaKnown RBP16.14■□□□□ 0.18
CCNE1-203ENST00000444983 MRPL58Q14197 206 aaKnown RBP16.14■□□□□ 0.18
CCNE1-203ENST00000444983 TAS1R1Q7RTX1 841 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 CCDC186Q7Z3E2 898 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 UNC93AQ86WB7 457 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 OSTM1Q86WC4 334 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 ADGRF2Q8IZF7 708 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 ZNF397Q8NF99 534 aaPredicted RBP16.14■□□□□ 0.18
CCNE1-203ENST00000444983 TWNKQ96RR1 684 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 RTP3Q9BQQ7 232 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 HMGXB4Q9UGU5 601 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 DSEQ9UL01 958 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 PCDHB12Q9Y5F1 795 aa16.14■□□□□ 0.18
CCNE1-203ENST00000444983 TIMM13Q9Y5L4 95 aaPredicted RBP16.14■□□□□ 0.18
CCNE1-203ENST00000444983 PLXNA4Q9HCM2 1894 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 CLSTN1O94985 981 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 TPM1P09493 284 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 FECHP22830 423 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 TKTP29401 623 aaKnown RBP16.14■□□□□ 0.17
CCNE1-203ENST00000444983 NDST1P52848 882 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 RAD23BP54727 409 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 MEA1Q16626 185 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 HGSNATQ68CP4 663 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 TMEM270Q6UE05 265 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.14■□□□□ 0.17
CCNE1-203ENST00000444983 SPRED2Q7Z698 418 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 DDX53Q86TM3 631 aaKnown RBP16.14■□□□□ 0.17
CCNE1-203ENST00000444983 PANX2Q96RD6 677 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 PLVAPQ9BX97 442 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 ELOVL4Q9GZR5 314 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 RWDD3Q9Y3V2 267 aa16.14■□□□□ 0.17
CCNE1-203ENST00000444983 ARHGEF37A1IGU5 675 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 FGF18O76093 207 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 GNL1P36915 607 aaPredicted RBP16.13■□□□□ 0.17
CCNE1-203ENST00000444983 PRKCIP41743 596 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 LHX1P48742 406 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 GSDMDP57764 484 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 RTP2Q5QGT7 225 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 FAM171A1Q5VUB5 890 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 SFMBT2Q5VUG0 894 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 CRYBG2Q8N1P7 616 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 KLHL23Q8NBE8 558 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 SLC4A11Q8NBS3 891 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 TMEM169Q96HH4 297 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 C17orf80Q9BSJ5 609 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 PCDHB4Q9Y5E5 795 aa16.13■□□□□ 0.17
CCNE1-203ENST00000444983 CYP26A1O43174 497 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 HCRTO43612 131 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 TBC1D4O60343 1298 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 GFPT2O94808 682 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 SOD2P04179 222 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 PAEPP09466 180 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 ERVK-21P61565 698 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 CDK17Q00537 523 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 TAP1Q03518 808 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 KIAA0319Q5VV43 1072 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 OVOS1Q6IE37 1185 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 TMEM139Q8IV31 216 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 FMNL3Q8IVF7 1028 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 RBBP8NLQ8NC74 664 aaPredicted RBP16.12■□□□□ 0.17
CCNE1-203ENST00000444983 OLIG1Q8TAK6 271 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 SYT11Q9BT88 431 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 NT5C1AQ9BXI3 368 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 ACP6Q9NPH0 428 aa16.12■□□□□ 0.17
CCNE1-203ENST00000444983 DDX43Q9NXZ2 648 aaKnown RBP16.12■□□□□ 0.17
CCNE1-203ENST00000444983 RB1P06400 928 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 FERP16591 822 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 YWHAHQ04917 246 aaPredicted RBP16.11■□□□□ 0.17
CCNE1-203ENST00000444983 USP41Q3LFD5 358 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 VARS2Q5ST30 1063 aaKnown RBP16.11■□□□□ 0.17
CCNE1-203ENST00000444983 SLC47A2Q86VL8 602 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 GPR65Q8IYL9 337 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 OR6B3Q8NGW1 331 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 TMEM176AQ96HP8 235 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 B3GALT6Q96L58 329 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 ZSWIM1Q9BR11 485 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 ACBD6Q9BR61 282 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 TTPALQ9BTX7 342 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms