RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 CCNI2Q6ZMN8 369 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 BZW1Q7L1Q6 419 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 STRADAQ7RTN6 431 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 HDXQ7Z353 690 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TMEM110Q86TL2 294 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SLC47A2Q86VL8 602 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ERICH1Q86X53 443 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TRIM50Q86XT4 487 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RELL1Q8IUW5 271 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ARHGEF19Q8IW93 802 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MAP7D3Q8IWC1 876 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 THNSL1Q8IYQ7 743 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 KATNAL2Q8IYT4 538 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RCOR2Q8IZ40 523 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RPUSD2Q8IZ73 545 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 C17orf53Q8N3J3 647 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 LRRC71Q8N4P6 559 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ZNF276Q8N554 614 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 GOLGA6L1Q8N7Z2 621 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ANKLE1Q8NAG6 615 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TTC13Q8NBP0 860 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RBBP8NLQ8NC74 664 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 BBOF1Q8ND07 529 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 OR5B17Q8NGF7 314 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 LNX1Q8TBB1 728 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 FEZF2Q8TBJ5 459 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ZNF564Q8TBZ8 553 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 FAM71BQ8TC56 605 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 GRK7Q8WTQ7 553 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 U2AF1L4Q8WU68 220 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 SLC35F5Q8WV83 523 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 KCTD13Q8WZ19 329 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TRIB2Q92519 343 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TSC1Q92574 1164 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TATDN2Q93075 761 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 CAVIN3Q969G5 261 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 C18orf25Q96B23 403 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 C18orf8Q96DM3 657 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MCRS1Q96EZ8 462 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 HPDLQ96IR7 371 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RBM41Q96IZ5 413 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 ZBTB45Q96K62 511 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 CAPNS2Q96L46 248 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SNX27Q96L92 541 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 GLT1D1Q96MS3 346 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 UIMC1Q96RL1 719 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SLC9A7Q96T83 725 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 POP1Q99575 1024 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 ZSWIM1Q9BR11 485 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SH2D3AQ9BRG2 576 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 KIFC3Q9BVG8 833 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SLC4A5Q9BY07 1137 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 FRMD8Q9BZ67 464 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 TRIM6Q9C030 488 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 ARHGAP39Q9C0H5 1083 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MTMR12Q9C0I1 747 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SENP6Q9GZR1 1112 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 R3HDMLQ9H3Y0 253 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ANKZF1Q9H8Y5 726 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 PPCSQ9HAB8 311 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 APOBEC3GQ9HC16 384 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 HMX1Q9NP08 348 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 XPNPEP3Q9NQH7 507 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 GDF3Q9NR23 364 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 FAM114A2Q9NRY5 505 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SETD4Q9NVD3 440 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 COMMD8Q9NX08 183 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 DONSONQ9NYP3 566 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 OGFRQ9NZT2 677 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 FLRT1Q9NZU1 646 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ADAM22Q9P0K1 906 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 STIM2Q9P246 746 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 CTTNBP2NLQ9P2B4 639 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RCOR3Q9P2K3 495 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 ANKFY1Q9P2R3 1169 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 HSFX1Q9UBD0 423 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 HDAC6Q9UBN7 1215 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 CNOT8Q9UFF9 292 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 DDX20Q9UHI6 824 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 SIX4Q9UIU6 781 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RASAL2Q9UJF2 1139 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SALL4Q9UJQ4 1053 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ABT1Q9ULW3 272 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 MAFFQ9ULX9 164 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 WDR3Q9UNX4 943 aaKnown RBP eCLIP3□□□□□ -1.93
LINC00393-201ENST00000443621 PHF24Q9UPV7 400 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 DRG1Q9Y295 367 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 TELO2Q9Y4R8 837 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 NUB1Q9Y5A7 615 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 PCDHB4Q9Y5E5 795 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RAD54BQ9Y620 910 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 DUSP10Q9Y6W6 482 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 COL4A4P53420 1690 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 FRMPD3Q5JV73 1810 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SMIM28A0A1B0GU29 152 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SPDYE4A6NLX3 237 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SRRM3A6NNA2 597 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 KPNA7A9QM74 516 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 C9IYK1 514 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 M0QZQ0 153 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms