RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ZNF699Q32M78 642 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 CCDC40Q4G0X9 1142 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 PPM1LQ5SGD2 360 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 ATAT1Q5SQI0 421 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 RARS2Q5T160 578 aaKnown RBP11.63□□□□□ -0.55
HDAC6-211ENST00000443563 TCERG1LQ5VWI1 586 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 KRT39Q6A163 491 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 SASS6Q6UVJ0 657 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 RSPO2Q6UXX9 243 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-211ENST00000443563 RBM43Q6ZSC3 357 aaKnown RBP11.63□□□□□ -0.55
HDAC6-211ENST00000443563 SV2AQ7L0J3 742 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 DCP1BQ8IZD4 617 aaKnown RBP11.63□□□□□ -0.55
HDAC6-211ENST00000443563 MMS19Q96T76 1030 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 DUSP9Q99956 384 aaKnown RBP11.63□□□□□ -0.55
HDAC6-211ENST00000443563 S1PR5Q9H228 398 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 PRKAG3Q9UGI9 489 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 AFF4Q9UHB7 1163 aaKnown RBP11.63□□□□□ -0.55
HDAC6-211ENST00000443563 BRWD1Q9NSI6 2320 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 CCDC195A0A1B0GUA6 201 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 WDR27A2RRH5 827 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 PRRG1O14668 218 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 XYLBO75191 536 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 ZMYND10O75800 440 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 C8AP07357 584 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 POU2F2P09086 479 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 SPATA31D3P0C874 917 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 TRIM49P0CI25 452 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 TRIM49CP0CI26 452 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 CCDC192P0DO97 292 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 ERCC5P28715 1186 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-211ENST00000443563 PCSK1P29120 753 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 MXI1P50539 228 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 STX17P56962 302 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 MYL6P60660 151 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 TSPY1Q01534 308 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 GPR17Q13304 367 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 CBX2Q14781 532 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-211ENST00000443563 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 DCAF17Q5H9S7 520 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-211ENST00000443563 ZNF667Q5HYK9 610 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 C1orf220Q5T0J3 134 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 WSCD1Q658N2 575 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 TMC5Q6UXY8 1006 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 SPATA31D4Q6ZUB0 917 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 GPR149Q86SP6 731 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 TCEAL8Q8IYN2 117 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 ADGRF2Q8IZF7 708 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 PDCL2Q8N4E4 241 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 C2orf15Q8WU43 125 aaKnown RBP11.62□□□□□ -0.55
HDAC6-211ENST00000443563 EEF2KMTQ96G04 330 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 FAM84AQ96KN4 292 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 ACBD6Q9BR61 282 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 SRRTQ9BXP5 876 aaKnown RBP11.62□□□□□ -0.55
HDAC6-211ENST00000443563 SNX25Q9H3E2 840 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 DDX43Q9NXZ2 648 aaKnown RBP11.62□□□□□ -0.55
HDAC6-211ENST00000443563 HSFX1Q9UBD0 423 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 L1RE1Q9UN81 338 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 USP15Q9Y4E8 981 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-211ENST00000443563 VCANP13611 3396 aa11.62□□□□□ -0.55
HDAC6-211ENST00000443563 N4BP1O75113 896 aaKnown RBP11.61□□□□□ -0.55
HDAC6-211ENST00000443563 TACC1O75410 805 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 PAPLNO95428 1278 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 HLA-DRAP01903 254 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 LRG1P02750 347 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 TRIM21P19474 475 aaKnown RBP11.61□□□□□ -0.55
HDAC6-211ENST00000443563 GCLMP48507 274 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 MARSP56192 900 aaKnown RBP11.61□□□□□ -0.55
HDAC6-211ENST00000443563 PPP3CAQ08209 521 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 CETN1Q12798 172 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 PLD1Q13393 1074 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 NFE2Q16621 373 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-211ENST00000443563 SOWAHAQ2M3V2 549 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 RNF19BQ6ZMZ0 732 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 LIMS2Q7Z4I7 341 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 C12orf76Q8N812 135 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-211ENST00000443563 FBXL13Q8NEE6 735 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 SLC7A14Q8TBB6 771 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 SUSD6Q92537 303 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 FAXDC2Q96IV6 333 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 APOL5Q9BWW9 433 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 PRKD2Q9BZL6 878 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 DNAI2Q9GZS0 605 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 ZCWPW1Q9H0M4 648 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 XYLT2Q9H1B5 865 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 MMRN2Q9H8L6 949 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 PIDD1Q9HB75 910 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 CYP4F11Q9HBI6 524 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 NXF1Q9UBU9 619 aaKnown RBP11.61□□□□□ -0.55
HDAC6-211ENST00000443563 C2orf16Q68DN1 1984 aa11.61□□□□□ -0.55
HDAC6-211ENST00000443563 TCF20Q9UGU0 1960 aaKnown RBP11.6□□□□□ -0.55
HDAC6-211ENST00000443563 DENND4AQ7Z401 1863 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 GABRDO14764 452 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 LETM1O95202 739 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-211ENST00000443563 VNN1O95497 513 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 ASS1P00966 412 aaKnown RBP11.6□□□□□ -0.55
HDAC6-211ENST00000443563 IL9P15248 144 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 WARSP23381 471 aaKnown RBP11.6□□□□□ -0.55
HDAC6-211ENST00000443563 GNL1P36915 607 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-211ENST00000443563 ADCY1Q08828 1119 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 MAPRE1Q15691 268 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms