RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 RAB27AP51159 221 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 SCARA5Q6ZMJ2 495 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 SLC35F6Q8N357 371 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 PACSIN1Q9BY11 444 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 OSBPL7Q9BZF2 842 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 CXCL16Q9H2A7 254 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 SPATS2LQ9NUQ6 558 aaKnown RBP8.61□□□□□ -1.03
CCDC39-201ENST00000442201 ATP8B3O60423 1300 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 TACC1O75410 805 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 MMEP08473 750 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 BFSP2Q13515 415 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 FBXO46Q6PJ61 603 aaPredicted RBP8.61□□□□□ -1.03
CCDC39-201ENST00000442201 RNF10Q8N5U6 811 aaKnown RBP8.61□□□□□ -1.03
CCDC39-201ENST00000442201 UBR7Q8N806 425 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 C18orf25Q96B23 403 aaPredicted RBP8.61□□□□□ -1.03
CCDC39-201ENST00000442201 THOC1Q96FV9 657 aaKnown RBP8.61□□□□□ -1.03
CCDC39-201ENST00000442201 TRAIPQ9BWF2 469 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 TUBGCP4Q9UGJ1 667 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 POLIQ9UNA4 740 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 MAP2K7O14733 419 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF623O75123 536 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 IMPDH2P12268 514 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 GZMAP12544 262 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 CHRNB2P17787 502 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 GNA15P30679 374 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 NAP1L1P55209 391 aaKnown RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 TNNC1P63316 161 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 FMO1Q01740 532 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 CC2D1AQ6P1N0 951 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 PALB2Q86YC2 1186 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 FAM126BQ8IXS8 530 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 TMEM130Q8N3G9 435 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 LRRC52Q8N7C0 313 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 TRIM58Q8NG06 486 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 MICAL1Q8TDZ2 1067 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 DDX1Q92499 740 aaKnown RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 NOX5Q96PH1 765 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ADAM2Q99965 735 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 BCO2Q9BYV7 579 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 CYP3A43Q9HB55 503 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 CTAGE9A4FU28 777 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 SKIP12755 728 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ATF7P17544 494 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF132P52740 706 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 GALCP54803 685 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 DSC3Q14574 896 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ARMCX6Q7L4S7 300 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 CTNNBL1Q8WYA6 563 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ALS2CR12Q96Q35 445 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 RPS6KC1Q96S38 1066 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 PCDHB18PQ96TA0 734 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 RNF19AQ9NV58 838 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 PUF60Q9UHX1 559 aaKnown RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF232Q9UNY5 417 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 GIT1Q9Y2X7 761 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ATXN2Q99700 1313 aaKnown RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 A0A0U1RQF3 1178 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 BTNL10A8MVZ5 291 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 FANCGO15287 622 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 MGEA5O60502 916 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 URI1O94763 535 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 TFRCP02786 760 aaKnown RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 TMEM253P0C7T8 217 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 SELPP16109 830 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 PECAM1P16284 738 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 CYP3A5P20815 502 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 RBBP5Q15291 538 aaKnown RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 IFI16Q16666 785 aaKnown RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF394Q53GI3 561 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 TRAF7Q6Q0C0 670 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 LRRC8DQ7L1W4 858 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 MRPL10Q7Z7H8 261 aaKnown RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 DNAAF5Q86Y56 855 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 TTC39CQ8N584 583 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 PGBD4Q96DM1 585 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ZFP42Q96MM3 310 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 MMS19Q96T76 1030 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 NAPGQ99747 312 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 FUT8Q9BYC5 575 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ISCUQ9H1K1 167 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 FAM124BQ9H5Z6 455 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-201ENST00000442201 SLC38A7Q9NVC3 462 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 TAS2R14Q9NYV8 317 aa8.6□□□□□ -1.03
CCDC39-201ENST00000442201 ANKRD62A6NC57 917 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 H3BQF6 201 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 PTGESO14684 152 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 THAP12O43422 761 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 MOCS3O95396 460 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 FTLP02792 175 aaPredicted RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 HSPA8P11142 646 aaKnown RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 ABCB4P21439 1286 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 CDH8P55286 799 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 C9orf57Q5W0N0 161 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 TRIM72Q6ZMU5 477 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 RBM12BQ8IXT5 1001 aaKnown RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 RNF169Q8NCN4 708 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF333Q96JL9 665 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF560Q96MR9 790 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 GAD1Q99259 594 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms