RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 RBAKQ9NYW8 714 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 FBXL5Q9UKA1 691 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 VAV3Q9UKW4 847 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 UBQLN1Q9UMX0 589 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 MYH11P35749 1972 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 PRRC2BQ5JSZ5 2229 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 SF3B1O75533 1304 aaKnown RBP eCLIP7.87□□□□□ -1.154e-6■■■■■ 37.8
CDC42BPA-208ENST00000442054 LINC01553A4QN01 128 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 H7C4K7 107 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 FNTAP49354 379 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 MYL7Q01449 175 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 GLE1Q53GS7 698 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 RARS2Q5T160 578 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 CCDC117Q8IWD4 279 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 TMEM174Q8WUU8 243 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 WNT8BQ93098 351 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 MS4A14Q96JA4 679 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 CAPZA3Q96KX2 299 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 RIPOR3Q96MK2 946 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZNF560Q96MR9 790 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 CEP63Q96MT8 703 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 SEPT5Q99719 369 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 STIM2Q9P246 746 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 TRAF3IP3Q9Y228 551 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 GIT1Q9Y2X7 761 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 ARID2Q68CP9 1835 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZSCAN5CA6NGD5 496 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 MCM3P25205 808 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 PRKCIP41743 596 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 GLUD2P49448 558 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 MRPS5P82675 430 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 UAP1Q16222 522 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZFYVE27Q5T4F4 411 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 CMTR2Q8IYT2 770 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 RASGEF1CQ8N431 466 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 AUTS2Q8WXX7 1259 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 PACSIN1Q9BY11 444 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 LRRC4CQ9HCJ2 640 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 AGAP1Q9UPQ3 857 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 CNTNAP2Q9UHC6 1331 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 MACROD2A1Z1Q3 448 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 SLC18A3Q16572 532 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZC2HC1CQ53FD0 456 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZNF280DQ6N043 979 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 EMBQ6PCB8 327 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 KCTD17Q8N5Z5 321 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 SLC43A3Q8NBI5 491 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 SMG7Q92540 1137 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZNF512Q96ME7 567 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 SYNCQ9H7C4 482 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 PLCB1Q9NQ66 1216 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 HYOU1Q9Y4L1 999 aa7.87□□□□□ -1.15
CDC42BPA-208ENST00000442054 A0A087X0T9 212 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 MBLAC1A4D2B0 266 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 OGTO15294 1046 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 EIF3HO15372 352 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 IVLP07476 585 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 FAM228BP0C875 321 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TCP1P17987 556 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 MAGEA9P43362 315 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 CCDC149Q6ZUS6 474 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 CASKIN2Q8WXE0 1202 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 CEP89Q96ST8 783 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 STRA6Q9BX79 667 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 EPB41L4BQ9H329 900 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 ERVK-5Q9HDB9 667 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TIMM13Q9Y5L4 95 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 SNX9Q9Y5X1 595 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 LCHNA4D1U4 455 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 MNX1P50219 401 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 GRIK3Q13003 919 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 ENOX2Q16206 610 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 NFIL3Q16649 462 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 C6orf89Q6UWU4 347 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZIM3Q96PE6 472 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 HINFPQ9BQA5 517 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 KIAA1586Q9HCI6 787 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 FAM207AQ9NSI2 230 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TBC1D13Q9NVG8 400 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 MTMR10Q9NXD2 777 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 FRMPD4Q14CM0 1322 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TMEM265A0A087WTH1 108 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 I3L4J1 428 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 DLL1O00548 723 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 SERPING1P05155 500 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 MYL4P12829 197 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 ATP4AP20648 1035 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 HSPA9P38646 679 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 CARSP49589 748 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 SLC7A5Q01650 507 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TAP1Q03518 808 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 KIF5AQ12840 1032 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 GPS2Q13227 327 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TUSC3Q13454 348 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 EDRF1Q3B7T1 1238 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TCEAL5Q5H9L2 206 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 ALS2CLQ60I27 953 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 EEF1DP3Q658K8 133 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 LMBRD2Q68DH5 695 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms