RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 WDR4P57081 412 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 GPS1Q13098 491 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 DCUN1D2Q6PH85 259 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 FAM47EQ6ZV65 393 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 TDRPQ86YL5 185 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 EGFL6Q8IUX8 553 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 OR5B17Q8NGF7 314 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 ASAP3Q8TDY4 903 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 KCNN1Q92952 543 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 ARHGEF3Q9NR81 526 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 FBXO40Q9UH90 709 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 IVNS1ABPQ9Y6Y0 642 aa17.43■□□□□ 0.38
SEMA3B-207ENST00000441915 POC1B-GALNT4F8VUJ3 575 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 ATP2A1O14983 1001 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 STAM2O75886 525 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 ASMTLO95671 621 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 TCF4P15884 667 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 PECAM1P16284 738 aaPredicted RBP17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 FOXN2P32314 431 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 MORF4L2Q15014 288 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 LRRC38Q5VT99 294 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 SLC7A3Q8WY07 619 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 DRG1Q9Y295 367 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 A0A0B4J269 797 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 SPATA31C2B4DYI2 1134 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 HGSO14964 777 aaPredicted RBP17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 SPAG7O75391 227 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 ALADP13716 330 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 KRT15P19012 456 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 SKIV2L2P42285 1042 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 OAZ1P54368 228 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 MGAT5Q09328 741 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 CCDC15Q0P6D6 951 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 KIF2BQ8N4N8 673 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 N4BP2L2Q92802 583 aaPredicted RBP17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 MCEEQ96PE7 176 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 SMC6Q96SB8 1091 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 DHX33Q9H6R0 707 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 SENP1Q9P0U3 644 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 CNTNAP2Q9UHC6 1331 aa17.42■□□□□ 0.38
SEMA3B-207ENST00000441915 PRPF4O43172 522 aaKnown RBP eCLIP17.41■□□□□ 0.381e-6■■■□□ 15.5
SEMA3B-207ENST00000441915 GCAP28676 217 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 SPARCL1Q14515 664 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 CIAPIN1Q6FI81 312 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 DNAJC24Q6P3W2 148 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ECHDC2Q86YB7 292 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 FBF1Q8TES7 1133 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 TRABDQ9H4I3 376 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 VPS37BQ9H9H4 285 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ZNF302Q9NR11 478 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 F8VP50 259 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 NDC80O14777 642 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 OATP04181 439 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 KRT16P08779 473 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ETS1P14921 441 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 SLC18A1P54219 525 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 PLCB3Q01970 1234 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 TFDP3Q5H9I0 405 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 HP1BP3Q5SSJ5 553 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 SPOCD1Q6ZMY3 1216 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ASRGL1Q7L266 308 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ZBED8Q8IZ13 594 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 REPS2Q8NFH8 660 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 CYP39A1Q9NYL5 469 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ZNF214Q9UL59 606 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 SMG5Q9UPR3 1016 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 STK38LQ9Y2H1 464 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 STARD13Q9Y3M8 1113 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 HARSP12081 509 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ATP4AP20648 1035 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ZNF132P52740 706 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 FASTKD3Q14CZ7 662 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 CENPUQ71F23 418 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 AGAP11Q8TF27 550 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 EBF2Q9HAK2 575 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 L3MBTL1Q9Y468 752 aa17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 MAFBQ9Y5Q3 323 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-207ENST00000441915 ADGRA2Q96PE1 1338 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 MAGEB2O15479 319 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 UNC5CO95185 931 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 LSM8O95777 96 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 CCNB1P14635 433 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 ARL2P36404 184 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 MSH2P43246 934 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 VCPP55072 806 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 ZNF252P-AS1Q0IIN9 211 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 DNAJC3Q13217 504 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 PIGHQ14442 188 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 SETDB1Q15047 1291 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 OASLQ15646 514 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 SEZ6Q53EL9 994 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 CAPN12Q6ZSI9 719 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 TMEM35BQ8NCS4 154 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 HAUS1Q96CS2 278 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 PPCSQ9HAB8 311 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 PHTF1Q9UMS5 762 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 hCG_1818297A0A087WSY0 165 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 LRRD1A4D1F6 860 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms