RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 C22orf31O95567 290 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ASS1P00966 412 aaKnown RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 TNNC2P02585 160 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 FGGP02679 453 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 CYP1A1P04798 512 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 PGK2P07205 417 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 TMEM191BP0C7N4 346 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 MYBL2P10244 700 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 UNGP13051 313 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 TMOD1P28289 359 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 GNA15P30679 374 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ID4P47928 161 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 FNTAP49354 379 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ZNF132P52740 706 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 C1QBPQ07021 282 aaKnown RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ARHGAP1Q07960 439 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 PTP4A2Q12974 167 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ZNF792Q3KQV3 632 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 HSDL1Q3SXM5 330 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 TUBB8Q3ZCM7 444 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ZNF568Q3ZCX4 644 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 TAF3Q5VWG9 929 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 PHF13Q86YI8 300 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 TTC39CQ8N584 583 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 C12orf50Q8NA57 414 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 RNF149Q8NC42 400 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 RBBP8NLQ8NC74 664 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 C1orf131Q8NDD1 294 aaKnown RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 CD101Q93033 1021 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ANKRD36BP1Q96IX9 119 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 CNTNAP3BQ96NU0 1288 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 PCDHB18PQ96TA0 734 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 CNTNAP3Q9BZ76 1288 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 MRPL47Q9HD33 250 aaKnown RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 SLC5A4Q9NY91 659 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 SMARCAL1Q9NZC9 954 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 CNOT8Q9UFF9 292 aaKnown RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 CPSF3Q9UKF6 684 aaKnown RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 TNFSF13BQ9Y275 285 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 UTP11Q9Y3A2 253 aaKnown RBP9.73□□□□□ -0.85
HDAC6-209ENST00000440653 TELO2Q9Y4R8 837 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 CEP83Q9Y592 693 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 CHD8Q9HCK8 2581 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 A0A1W2PQ45 241 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 A0A1W2PQY0 241 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 DCDC2CA8MYV0 355 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ABLIM1O14639 778 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 SART1O43290 800 aaKnown RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ERLIN2O94905 339 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ARHGEF15O94989 841 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 VNN1O95497 513 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 LGALS2P05162 132 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 CALB1P05937 261 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 HOXC6P09630 235 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 MCF2P10911 925 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 HOXD8P13378 290 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 MARK3P27448 753 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ADORA2AP29274 412 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 HSPA9P38646 679 aaKnown RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ACOT2P49753 483 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 RWDD2BP57060 319 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 TAP1Q03518 808 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 PCBP1Q15365 356 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 CYP1B1Q16678 543 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 DUOXA2Q1HG44 320 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 CFAP58Q5T655 872 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ATF7IP2Q5U623 682 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 DCAF12L1Q5VU92 463 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 PSRC1Q6PGN9 363 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 MAMDC4Q6UXC1 1216 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 LRIG3Q6UXM1 1119 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 MON1BQ7L1V2 547 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ZNF771Q7L3S4 317 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 EEPD1Q7L9B9 569 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 OTOP2Q7RTS6 562 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ASCL5Q7RTU5 278 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ANKRD33Q7Z3H0 272 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 NT5DC4Q86YG4 428 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 CD302Q8IX05 232 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 KLHL7Q8IXQ5 586 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 GSPT2Q8IYD1 628 aaKnown RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 MCOLN2Q8IZK6 566 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 UBR7Q8N806 425 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 POP1Q99575 1024 aaKnown RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 SH3GL2Q99962 352 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 PPP1R12CQ9BZL4 782 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ZNF518BQ9C0D4 1074 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 FZD8Q9H461 694 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 GOLPH3Q9H4A6 298 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 SUGCTQ9HAC7 445 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 EPB41L5Q9HCM4 733 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ALG13Q9NP73 1137 aaKnown RBP9.72□□□□□ -0.85
HDAC6-209ENST00000440653 VPS18Q9P253 973 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 ALG6Q9Y672 507 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 PTPRJQ12913 1337 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 PLXNA3P51805 1871 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 KAT6AQ92794 2004 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 EVPLQ92817 2033 aa9.72□□□□□ -0.85
HDAC6-209ENST00000440653 COL4A6Q14031 1691 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms