RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CFHP08603 1231 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 PAEPP09466 180 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 WEE2P0C1S8 567 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 ACO1P21399 889 aaKnown RBP15.02■□□□□ -0
LIMD1-202ENST00000440097 RRM1P23921 792 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 SLC8A1P32418 973 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 ZNF157P51786 506 aaPredicted RBP15.02■□□□□ -0
LIMD1-202ENST00000440097 HADHBP55084 474 aaKnown RBP15.02■□□□□ -0
LIMD1-202ENST00000440097 IFFO1Q0D2I5 559 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 TMEM62Q0P6H9 643 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 DGKDQ16760 1214 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 AGBL2Q5U5Z8 902 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 ZNF467Q7Z7K2 595 aaPredicted RBP15.02■□□□□ -0
LIMD1-202ENST00000440097 NPLOC4Q8TAT6 608 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 C16orf70Q9BSU1 422 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 MGRN1O60291 552 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 ASS1P00966 412 aaKnown RBP15.02□□□□□ -0.01
LIMD1-202ENST00000440097 GRIK4Q16099 956 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 SGSM1Q2NKQ1 1148 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 DUSP28Q4G0W2 176 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 LLGL2Q6P1M3 1020 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 RASGEF1CQ8N431 466 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 ZSWIM1Q9BR11 485 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 FAM49AQ9H0Q0 323 aaPredicted RBP15.02□□□□□ -0.01
LIMD1-202ENST00000440097 ABLIM1O14639 778 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 DNAJC8O75937 253 aaPredicted RBP15.02□□□□□ -0.01
LIMD1-202ENST00000440097 MMP3P08254 477 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 DRD4P21917 467 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 TNFAIP2Q03169 654 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 SEL1L2Q5TEA6 688 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 MTHFD1LQ6UB35 978 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 MCOLN2Q8IZK6 566 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 EIF1ADQ8N9N8 165 aaKnown RBP15.02□□□□□ -0.01
LIMD1-202ENST00000440097 CCDC26Q8TAB7 109 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 TRIM31Q9BZY9 425 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 NIF3L1Q9GZT8 377 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 KATNBL1Q9H079 304 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 LRRC4CQ9HCJ2 640 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 ADAM22Q9P0K1 906 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 TNFSF13BQ9Y275 285 aa15.02□□□□□ -0.01
LIMD1-202ENST00000440097 SIP14410 1827 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 GPR25O00155 361 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 HOXC6P09630 235 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 UNGP13051 313 aaPredicted RBP15.01□□□□□ -0.01
LIMD1-202ENST00000440097 GBP2P32456 591 aaPredicted RBP15.01□□□□□ -0.01
LIMD1-202ENST00000440097 SSR1P43307 286 aaKnown RBP15.01□□□□□ -0.01
LIMD1-202ENST00000440097 ELF3P78545 371 aaPredicted RBP15.01□□□□□ -0.01
LIMD1-202ENST00000440097 TAF1CQ15572 869 aaPredicted RBP15.01□□□□□ -0.01
LIMD1-202ENST00000440097 ACCSLQ4AC99 568 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 TBC1D31Q96DN5 1066 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 CELF4Q9BZC1 486 aaKnown RBP15.01□□□□□ -0.01
LIMD1-202ENST00000440097 KDM4CQ9H3R0 1056 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 PTPRHQ9HD43 1115 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 SETD4Q9NVD3 440 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 A0A1B0GUA9 196 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 ATP6V1G2O95670 118 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 STAG3L1P0CL83 205 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 PROZP22891 400 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 SATB1Q01826 763 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 KRT71Q3SY84 523 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 LIN9Q5TKA1 542 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 CST9Q5W186 159 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 MDM1Q8TC05 714 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 TRIM11Q96F44 468 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 RPS6KC1Q96S38 1066 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 TRIM7Q9C029 511 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 WNT8AQ9H1J5 351 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 CISHQ9NSE2 258 aa15.01□□□□□ -0.01
LIMD1-202ENST00000440097 RBM47A0AV96 593 aaKnown RBP15□□□□□ -0.01
LIMD1-202ENST00000440097 TTI1O43156 1089 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 FGFR4P22455 802 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 NAA25Q14CX7 972 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 KIZQ2M2Z5 673 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 WDR72Q3MJ13 1102 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 P3H4Q92791 437 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 EMID1Q96A84 441 aaPredicted RBP15□□□□□ -0.01
LIMD1-202ENST00000440097 NOD2Q9HC29 1040 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 SLC24A3Q9HC58 644 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 BAIAP2L1Q9UHR4 511 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 DAPK3O43293 454 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 NFICP08651 508 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 GHRP10912 638 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 ARF4P18085 180 aaPredicted RBP15□□□□□ -0.01
LIMD1-202ENST00000440097 SF3A3Q12874 501 aaKnown RBP eCLIP15□□□□□ -0.01
LIMD1-202ENST00000440097 HIBCHQ6NVY1 386 aaPredicted RBP15□□□□□ -0.01
LIMD1-202ENST00000440097 ZNF606Q8WXB4 792 aa15□□□□□ -0.01
LIMD1-202ENST00000440097 LENG1Q96BZ8 264 aaPredicted RBP15□□□□□ -0.01
LIMD1-202ENST00000440097 ADCY6O43306 1168 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 CD19P15391 556 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 BRD2P25440 801 aaKnown RBP14.99□□□□□ -0.01
LIMD1-202ENST00000440097 CENPCQ03188 943 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 MTMR3Q13615 1198 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 PPP1R7Q15435 360 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 IQSEC1Q6DN90 963 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 UTP11Q9Y3A2 253 aaKnown RBP14.99□□□□□ -0.01
LIMD1-202ENST00000440097 KAT6AQ92794 2004 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 SLC15A5A6NIM6 579 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 LACTBL1A8MY62 500 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 MTA2O94776 668 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms