RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 CNOT8Q9UFF9 292 aaKnown RBP20.93■□□□□ 0.94
APTR-204ENST00000440088 BUB1BO60566 1050 aaPredicted RBP20.92■□□□□ 0.94
APTR-204ENST00000440088 SRGAP2O75044 1071 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 C1QTNF8P60827 252 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 MON1BQ7L1V2 547 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 LRRC8DQ7L1W4 858 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 PHF13Q86YI8 300 aaPredicted RBP20.92■□□□□ 0.94
APTR-204ENST00000440088 RNF169Q8NCN4 708 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 TMEM35BQ8NCS4 154 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 NT5C1AQ9BXI3 368 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 GOLPH3Q9H4A6 298 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 RSAD1Q9HA92 442 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 UBN1Q9NPG3 1134 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 GDAP2Q9NXN4 497 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 MTA2O94776 668 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 PEX26Q7Z412 305 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 OSBPL9Q96SU4 736 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 NUP85Q9BW27 656 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 AVENQ9NQS1 362 aaPredicted RBP20.92■□□□□ 0.94
APTR-204ENST00000440088 ADAM22Q9P0K1 906 aa20.92■□□□□ 0.94
APTR-204ENST00000440088 ORC1Q13415 861 aa20.91■□□□□ 0.94
APTR-204ENST00000440088 ZNF564Q8TBZ8 553 aaPredicted RBP20.91■□□□□ 0.94
APTR-204ENST00000440088 HEXIM2Q96MH2 286 aaKnown RBP20.91■□□□□ 0.94
APTR-204ENST00000440088 TSPYL2Q9H2G4 693 aaPredicted RBP20.91■□□□□ 0.94
APTR-204ENST00000440088 KIAA1257Q9ULG3 409 aa20.91■□□□□ 0.94
APTR-204ENST00000440088 SPTLC1O15269 473 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 TFRCP02786 760 aaKnown RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 VDRP11473 427 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 CDH5P33151 784 aaPredicted RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 SCNN1GP51170 649 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 AFF1P51825 1210 aaKnown RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 LILRA4P59901 499 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 C1QBPQ07021 282 aaKnown RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 SOWAHAQ2M3V2 549 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 LIN9Q5TKA1 542 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 LRRN4CLQ8ND94 238 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 MRPL45Q9BRJ2 306 aaKnown RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 C11orf70Q9BRQ4 267 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 LHX5Q9H2C1 402 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 RGS18Q9NS28 235 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 CHORDC1Q9UHD1 332 aaPredicted RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 PACSIN2Q9UNF0 486 aaPredicted RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 EFCAB8A8MWE9 144 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 PITPNM1O00562 1244 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 IBSPP21815 317 aaPredicted RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 RPS6KA1Q15418 735 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 SGO2Q562F6 1265 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 CTU1Q7Z7A3 348 aaKnown RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 ECHDC2Q86YB7 292 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 C1orf131Q8NDD1 294 aaKnown RBP20.9■□□□□ 0.94
APTR-204ENST00000440088 PSMB7Q99436 277 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 FTHL17Q9BXU8 183 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 MIOSQ9NXC5 875 aa20.9■□□□□ 0.94
APTR-204ENST00000440088 DYNC1I1O14576 645 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 MMP8P22894 467 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 RRM1P23921 792 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 C11orf63Q6NUN7 778 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 SLC24A5Q71RS6 500 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 NT5DC3Q86UY8 548 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 UNC93AQ86WB7 457 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 DNAJC5GQ8N7S2 189 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 APPL2Q8NEU8 664 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 CAPZA3Q96KX2 299 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 ABCB6Q9NP58 842 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 AMFRQ9UKV5 643 aa20.89■□□□□ 0.93
APTR-204ENST00000440088 ZNF185O15231 689 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 PQBP1O60828 265 aaKnown RBP20.88■□□□□ 0.93
APTR-204ENST00000440088 TADA3O75528 432 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 KIF4AO95239 1232 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 CXCR5P32302 372 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 CKAP4Q07065 602 aaKnown RBP20.88■□□□□ 0.93
APTR-204ENST00000440088 CNGA2Q16280 664 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 C2CD6Q53TS8 623 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 MMS22LQ6ZRQ5 1243 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 ZNF598Q86UK7 904 aaKnown RBP20.88■□□□□ 0.93
APTR-204ENST00000440088 OR6B3Q8NGW1 331 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 COG1Q8WTW3 980 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 ZNF333Q96JL9 665 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 CRISPLD2Q9H0B8 497 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.88■□□□□ 0.93
APTR-204ENST00000440088 CTAGE15A4D2H0 777 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 HUS1O60921 280 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 EOMESO95936 686 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 CALB1P05937 261 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 CTAGE8P0CG41 777 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 FBXO46Q6PJ61 603 aaPredicted RBP20.88■□□□□ 0.93
APTR-204ENST00000440088 DPH6Q7L8W6 267 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 CTAGE6Q86UF2 777 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 CTAGE4Q8IX94 777 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 STXBP5LQ9Y2K9 1186 aa20.88■□□□□ 0.93
APTR-204ENST00000440088 C9IYK1 514 aa20.87■□□□□ 0.93
APTR-204ENST00000440088 O00370 1275 aa20.87■□□□□ 0.93
APTR-204ENST00000440088 RPL9P32969 192 aaKnown RBP20.87■□□□□ 0.93
APTR-204ENST00000440088 DNA2P51530 1060 aa20.87■□□□□ 0.93
APTR-204ENST00000440088 ATN1P54259 1190 aaPredicted RBP20.87■□□□□ 0.93
APTR-204ENST00000440088 PTP4A2Q12974 167 aa20.87■□□□□ 0.93
APTR-204ENST00000440088 STILQ15468 1287 aa20.87■□□□□ 0.93
APTR-204ENST00000440088 DENND1BQ6P3S1 775 aa20.87■□□□□ 0.93
APTR-204ENST00000440088 LIMS2Q7Z4I7 341 aa20.87■□□□□ 0.93
APTR-204ENST00000440088 RTN4RL1Q86UN2 441 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms