RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 TLR9Q9NR96 1032 aa8.09□□□□□ -1.12
COPS3-203ENST00000439936 ADAM28Q9UKQ2 775 aa8.09□□□□□ -1.12
COPS3-203ENST00000439936 UBQLN1Q9UMX0 589 aaKnown RBP8.09□□□□□ -1.12
COPS3-203ENST00000439936 DERAQ9Y315 318 aa8.09□□□□□ -1.12
COPS3-203ENST00000439936 REV3LO60673 3130 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 HIDE1A8MVS5 230 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 TMEM189-UBE2V1I3L0A0 370 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 PODXLO00592 558 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 PER2O15055 1255 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 XPOTO43592 962 aaKnown RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 EXOC3O60645 756 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 B3GAT3O94766 335 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 KIF4AO95239 1232 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 NFICP08651 508 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 CTSAP10619 480 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 LRPAP1P30533 357 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 MCM4P33991 863 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
COPS3-203ENST00000439936 BRCC3P46736 316 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 CASP4P49662 377 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 ADAM9Q13443 819 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 MYBPC2Q14324 1141 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 TMEM132DQ14C87 1099 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 SNRNP35Q16560 246 aaKnown RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 KIAA0319Q5VV43 1072 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 PLPP4Q5VZY2 271 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 ANKRD40Q6AI12 368 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 SCARA3Q6AZY7 606 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 FUT10Q6P4F1 479 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 RBM23Q86U06 439 aaKnown RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 EFCAB13Q8IY85 973 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 RNF168Q8IYW5 571 aaPredicted RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 ADSSL1Q8N142 457 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 BEST2Q8NFU1 509 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 GOLGA5Q8TBA6 731 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 CACTINQ8WUQ7 758 aaKnown RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 TMEM174Q8WUU8 243 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 MFSD14AQ96MC6 490 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 POP1Q99575 1024 aaKnown RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 TCF25Q9BQ70 676 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 ZBP1Q9H171 429 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 CLSTN2Q9H4D0 955 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 NSUN3Q9H649 340 aaKnown RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 IGFLR1Q9H665 355 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 NGRNQ9NPE2 291 aaKnown RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 CHST7Q9NS84 486 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 CUEDC1Q9NWM3 386 aaPredicted RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 DPP3Q9NY33 737 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 RBAKQ9NYW8 714 aaPredicted RBP8.08□□□□□ -1.12
COPS3-203ENST00000439936 TUBGCP4Q9UGJ1 667 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 IRAK3Q9Y616 596 aa8.08□□□□□ -1.12
COPS3-203ENST00000439936 VWA8A3KMH1 1905 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 MTCL1Q9Y4B5 1905 aaKnown RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 ANO9A1A5B4 782 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 C2orf71A6NGG8 1288 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 I3L4J1 428 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 PIRO00625 290 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 C2CD2LO14523 706 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 PPEF2O14830 753 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 CALUO43852 315 aaPredicted RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 NR3C1P04150 777 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 SOD2P04179 222 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 CCNE1P24864 410 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 PMS1P54277 932 aaKnown RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 TFAMQ00059 246 aaKnown RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 CYP24A1Q07973 514 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 HYAL1Q12794 435 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 ADAM15Q13444 863 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 SMC1AQ14683 1233 aaKnown RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 PSMD6Q15008 389 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 SURF1Q15526 300 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 NFIL3Q16649 462 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 USP41Q3LFD5 358 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 ZCWPW2Q504Y3 356 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 TIGD5Q53EQ6 642 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 FAM171A1Q5VUB5 890 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 LMBRD2Q68DH5 695 aaPredicted RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 CEP57Q86XR8 500 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 NT5DC4Q86YG4 428 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 VWA5B2Q8N398 1253 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 OR5B17Q8NGF7 314 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 PLEKHO2Q8TD55 490 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 PARD3BQ8TEW8 1205 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 DHTKD1Q96HY7 919 aaPredicted RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 FAM84AQ96KN4 292 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 B3GALT6Q96L58 329 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 HERC2P3Q9BVR0 1158 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 GZF1Q9H116 711 aaPredicted RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 TLE6Q9H808 572 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 PRDM6Q9NQX0 595 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 ENTPD7Q9NQZ7 604 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 INTS13Q9NVM9 706 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 DNAAF2Q9NVR5 837 aaKnown RBP8.07□□□□□ -1.12
COPS3-203ENST00000439936 STK39Q9UEW8 545 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 C2CD2Q9Y426 696 aa8.07□□□□□ -1.12
COPS3-203ENST00000439936 CDH23Q9H251 3354 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 TRAPPC3O43617 180 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms