RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 SFMBT2Q5VUG0 894 aa8□□□□□ -1.13
UBR3-205ENST00000439681 HGSNATQ68CP4 663 aa8□□□□□ -1.13
UBR3-205ENST00000439681 FUT10Q6P4F1 479 aa8□□□□□ -1.13
UBR3-205ENST00000439681 TMEM270Q6UE05 265 aa8□□□□□ -1.13
UBR3-205ENST00000439681 SPRED2Q7Z698 418 aa8□□□□□ -1.13
UBR3-205ENST00000439681 CNGA4Q8IV77 575 aa8□□□□□ -1.13
UBR3-205ENST00000439681 ADGRF2Q8IZF7 708 aa8□□□□□ -1.13
UBR3-205ENST00000439681 PANX2Q96RD6 677 aa8□□□□□ -1.13
UBR3-205ENST00000439681 NUCKS1Q9H1E3 243 aaKnown RBP8□□□□□ -1.13
UBR3-205ENST00000439681 FAM124BQ9H5Z6 455 aaPredicted RBP8□□□□□ -1.13
UBR3-205ENST00000439681 SPG21Q9NZD8 308 aa8□□□□□ -1.13
UBR3-205ENST00000439681 BARX2Q9UMQ3 279 aaPredicted RBP8□□□□□ -1.13
UBR3-205ENST00000439681 YBX2Q9Y2T7 364 aaKnown RBP8□□□□□ -1.13
UBR3-205ENST00000439681 PCDHA11Q9Y5I1 949 aa8□□□□□ -1.13
UBR3-205ENST00000439681 RALGAPA2Q2PPJ7 1873 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.99□□□□□ -1.13
UBR3-205ENST00000439681 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.99□□□□□ -1.13
UBR3-205ENST00000439681 TRAPPC3O43617 180 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 OAZ2O95190 189 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 ODC1P11926 461 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 SKILP12757 684 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 KRT5P13647 590 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 FECHP22830 423 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 TKTP29401 623 aaKnown RBP7.99□□□□□ -1.13
UBR3-205ENST00000439681 USP8P40818 1118 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 GSDMDP57764 484 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 ORC1Q13415 861 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 FAM171A1Q5VUB5 890 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 KIAA0319Q5VV43 1072 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 SLC47A2Q86VL8 602 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 UNC93AQ86WB7 457 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 TMEM139Q8IV31 216 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 TMEM86AQ8N2M4 240 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 SLC4A11Q8NBS3 891 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 RBBP8NLQ8NC74 664 aaPredicted RBP7.99□□□□□ -1.13
UBR3-205ENST00000439681 OR6B3Q8NGW1 331 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 OLIG1Q8TAK6 271 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 B3GALT6Q96L58 329 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 ZSWIM1Q9BR11 485 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 CHST7Q9NS84 486 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 STXBP5LQ9Y2K9 1186 aa7.99□□□□□ -1.13
UBR3-205ENST00000439681 SYN3O14994 580 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 CA3P07451 260 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 PDGFRBP09619 1106 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 FERP16591 822 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 PRKCIP41743 596 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 YWHAEP62258 255 aaKnown RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 PLCB3Q01970 1234 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 MLLT1Q03111 559 aaPredicted RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 ARID5AQ03989 594 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 ASIC2Q16515 512 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 RTP2Q5QGT7 225 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 DDX53Q86TM3 631 aaKnown RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 LRRC8AQ8IWT6 810 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 TDHQ8IZJ6 230 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 CRYBG2Q8N1P7 616 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 TTC39CQ8N584 583 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 KLHL23Q8NBE8 558 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 SPATA18Q8TC71 538 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 DDX1Q92499 740 aaKnown RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 TMEM176AQ96HP8 235 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 CHP1Q99653 195 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 LPIN3Q9BQK8 851 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 C17orf80Q9BSJ5 609 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 SYT11Q9BT88 431 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 PBX4Q9BYU1 374 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 SNX25Q9H3E2 840 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 DPEP3Q9H4B8 488 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 AAASQ9NRG9 546 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 DSEQ9UL01 958 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 PCDHB12Q9Y5F1 795 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 SF3B1O75533 1304 aaKnown RBP eCLIP7.98□□□□□ -1.139e-7■■■■■ 57.4
UBR3-205ENST00000439681 CARNS1A5YM72 827 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 A8MXQ7 604 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 TBC1D4O60343 1298 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 ATP2C2O75185 946 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 FGF18O76093 207 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 PLEKP08567 350 aaPredicted RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 PAEPP09466 180 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 CYP11B1P15538 503 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 CHRNB2P17787 502 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 ACAT1P24752 427 aaKnown RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 LHX1P48742 406 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 CDK17Q00537 523 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 TAP1Q03518 808 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 ELAVL2Q12926 359 aaKnown RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 VARS2Q5ST30 1063 aaKnown RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 OVOS1Q6IE37 1185 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 CHRDL2Q6WN34 429 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 ZNF571Q7Z3V5 609 aaPredicted RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 ACOT1Q86TX2 421 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 NOP9Q86U38 636 aaKnown RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 METTL23Q86XA0 190 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 TFAP2BQ92481 460 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 NT5C1AQ9BXI3 368 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 HAUS4Q9H6D7 363 aa7.98□□□□□ -1.13
UBR3-205ENST00000439681 DDX43Q9NXZ2 648 aaKnown RBP7.98□□□□□ -1.13
UBR3-205ENST00000439681 ARHGAP20Q9P2F6 1191 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms