RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ING5Q8WYH8 240 aa25.84■■□□□ 1.73
CPNE1-217ENST00000439669 FGF13Q92913 245 aa25.84■■□□□ 1.73
CPNE1-217ENST00000439669 HPDLQ96IR7 371 aa25.84■■□□□ 1.73
CPNE1-217ENST00000439669 MFSD14AQ96MC6 490 aa25.84■■□□□ 1.73
CPNE1-217ENST00000439669 RTP3Q9BQQ7 232 aa25.84■■□□□ 1.73
CPNE1-217ENST00000439669 ZCWPW1Q9H0M4 648 aa25.84■■□□□ 1.73
CPNE1-217ENST00000439669 L1RE1Q9UN81 338 aa25.84■■□□□ 1.73
CPNE1-217ENST00000439669 DOCK8Q8NF50 2099 aa25.84■■□□□ 1.73
CPNE1-217ENST00000439669 TECTAO75443 2155 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 CALUO43852 315 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-217ENST00000439669 ANP32AP39687 249 aaKnown RBP25.83■■□□□ 1.73
CPNE1-217ENST00000439669 PLD1Q13393 1074 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 TDGQ13569 410 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 SNW1Q13573 536 aaKnown RBP25.83■■□□□ 1.73
CPNE1-217ENST00000439669 HFE2Q6ZVN8 426 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 SLC9A9Q8IVB4 645 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 ENGASEQ8NFI3 743 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 RSAD2Q8WXG1 361 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 ZNF512Q96ME7 567 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-217ENST00000439669 CRISPLD1Q9H336 500 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 GDAP2Q9NXN4 497 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 SLC27A5Q9Y2P5 690 aa25.83■■□□□ 1.73
CPNE1-217ENST00000439669 ZFP37Q9Y6Q3 630 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-217ENST00000439669 CDR1P51861 262 aa25.82■■□□□ 1.72
CPNE1-217ENST00000439669 CEP135Q66GS9 1140 aa25.82■■□□□ 1.72
CPNE1-217ENST00000439669 CENPPQ6IPU0 288 aa25.82■■□□□ 1.72
CPNE1-217ENST00000439669 ST13P5Q8NFI4 369 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-217ENST00000439669 DMAC2Q9NW81 257 aa25.82■■□□□ 1.72
CPNE1-217ENST00000439669 ALDH1A3P47895 512 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 CASP4P49662 377 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 TSPY1Q01534 308 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 SLC5A9Q2M3M2 681 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 PDZD4Q76G19 769 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-217ENST00000439669 NPAS3Q8IXF0 933 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 DCP1BQ8IZD4 617 aaKnown RBP25.81■■□□□ 1.72
CPNE1-217ENST00000439669 ADGRF2Q8IZF7 708 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 TMEM86AQ8N2M4 240 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 GUF1Q8N442 669 aaKnown RBP25.81■■□□□ 1.72
CPNE1-217ENST00000439669 TTC9BQ8N6N2 239 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 TOP6BLQ8N6T0 577 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 RMND1Q9NWS8 449 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 CEP72Q9P209 647 aa25.81■■□□□ 1.72
CPNE1-217ENST00000439669 HOOK1Q9UJC3 728 aaKnown RBP25.81■■□□□ 1.72
CPNE1-217ENST00000439669 PHACTR2O75167 634 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 EPHB3P54753 998 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 MYL7Q01449 175 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 CYP4A22Q5TCH4 519 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 HS6ST3Q8IZP7 471 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 PLEKHO2Q8TD55 490 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 NXPE3Q969Y0 559 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 PBXIP1Q96AQ6 731 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 ASIC4Q96FT7 647 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 SEPT5Q99719 369 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-217ENST00000439669 GZF1Q9H116 711 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-217ENST00000439669 AVENQ9NQS1 362 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-217ENST00000439669 ASAH2Q9NR71 780 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 DDX43Q9NXZ2 648 aaKnown RBP25.8■■□□□ 1.72
CPNE1-217ENST00000439669 ABI2Q9NYB9 513 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-217ENST00000439669 TRAF3IP3Q9Y228 551 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 FRMD4BQ9Y2L6 1034 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 NOTCH4Q99466 2003 aa25.8■■□□□ 1.72
CPNE1-217ENST00000439669 ZNF197O14709 1029 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 SOAT2O75908 522 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 CLSTN1O94985 981 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 SMC2O95347 1197 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 MYL4P12829 197 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 CEBPBP17676 345 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 ACAT1P24752 427 aaKnown RBP25.79■■□□□ 1.72
CPNE1-217ENST00000439669 SMARCB1Q12824 385 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 BIRC3Q13489 604 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 TRPC3Q13507 836 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 HTR4Q13639 388 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 MGAT5BQ3V5L5 792 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 LRRTM3Q86VH5 581 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 SMYD4Q8IYR2 804 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-217ENST00000439669 TMEM174Q8WUU8 243 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 ZNF516Q92618 1163 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 TIGD1Q96MW7 591 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 CHMP5Q9NZZ3 219 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 RAPGEFL1Q9UHV5 662 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 DUSP12Q9UNI6 340 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 NUMBLQ9Y6R0 609 aa25.79■■□□□ 1.72
CPNE1-217ENST00000439669 LRRIQ3A6PVS8 624 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-217ENST00000439669 ANHXE9PGG2 379 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 NR2F2P24468 414 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 SOWAHAQ2M3V2 549 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 OSTM1Q86WC4 334 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 LEMD2Q8NC56 503 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 SPATA18Q8TC71 538 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 SPPL2BQ8TCT7 592 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 PARD3BQ8TEW8 1205 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 C2orf15Q8WU43 125 aaKnown RBP25.78■■□□□ 1.72
CPNE1-217ENST00000439669 ERCC4Q92889 916 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-217ENST00000439669 SMARCE1Q969G3 411 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 TCEAL4Q96EI5 215 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 MCRS1Q96EZ8 462 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 MMS19Q96T76 1030 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 HSFX1Q9UBD0 423 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 HCN4Q9Y3Q4 1203 aa25.78■■□□□ 1.72
CPNE1-217ENST00000439669 NARSO43776 548 aaKnown RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms