RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HGSNATQ68CP4 663 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CRELD2Q6UXH1 353 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 C15orf39Q6ZRI6 1047 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM43BQ6ZT52 329 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 IRF2BP2Q7Z5L9 587 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 RNF180Q86T96 592 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 NT5DC4Q86YG4 428 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 WDR49Q8IV35 697 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 BRSK2Q8IWQ3 736 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 TTC39CQ8N584 583 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 RNF10Q8N5U6 811 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRPV1Q8NER1 839 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 LMO3Q8TAP4 145 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 RAET1EQ8TD07 263 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 UBE2Q2Q8WVN8 375 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRIB2Q92519 343 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 DHX38Q92620 1227 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 TAF4BQ92750 862 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAXDC2Q96IV6 333 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZBTB45Q96K62 511 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CGRRF1Q99675 332 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 FDXACB1Q9BRP7 624 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ADPGKQ9BRR6 497 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 DESI2Q9BSY9 194 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 IFIH1Q9BYX4 1025 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 IMPG2Q9BZV3 1241 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ARHGAP39Q9C0H5 1083 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ADAMTS10Q9H324 1103 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM124BQ9H5Z6 455 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ASB7Q9H672 318 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 RPF1Q9H9Y2 349 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 IFT122Q9HBG6 1241 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 PTPRHQ9HD43 1115 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 SIX2Q9NPC8 291 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 UBE2TQ9NPD8 197 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 C1orf112Q9NSG2 853 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 RAB20Q9NX57 234 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ARHGAP20Q9P2F6 1191 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CPSF3Q9UKF6 684 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 GABRQQ9UN88 632 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 FNDC3AQ9Y2H6 1198 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 R3HCC1Q9Y3T6 440 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 PCDHA13Q9Y5I0 950 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 FHOD1Q9Y613 1164 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ATP8B3O60423 1300 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRIP11Q15643 1979 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 CTAGE9A4FU28 777 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 FOXN3O00409 490 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 ABLIM1O14639 778 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 GPR182O15218 404 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 NDUFB5O43674 189 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM189A1O60320 539 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 B4GALT4O60513 344 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 TSPAN1O60635 241 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 GPR32O75388 356 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 TACC1O75410 805 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 HLA-DRAP01903 254 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 C4BPAP04003 597 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 RPLP1P05386 114 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 GJB1P08034 283 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 IQCF3P0C7M6 154 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 STAG3L1P0CL83 205 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 ARAFP10398 606 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 HARSP12081 509 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 DARSP14868 501 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 PCSK2P16519 638 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 ARF4P18085 180 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 NFKB1P19838 968 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 TNFAIP3P21580 790 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 TARSP26639 723 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 MZF1P28698 734 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 CASQ1P31415 396 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 PIK3CAP42336 1068 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 YARSP54577 528 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 PCBP4P57723 403 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 YWHAEP62258 255 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 TUBB4BP68371 445 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 ADAM17P78536 824 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 MRPS6P82932 125 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 BEX3Q00994 111 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 ARID5AQ03989 594 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 BIRC3Q13489 604 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRPC3Q13507 836 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 NAB2Q15742 525 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 IFI16Q16666 785 aaKnown RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 ASTE1Q2TB18 679 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 CCDC122Q5T0U0 273 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF468Q5VIY5 522 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 PPP1R2P3Q6NXS1 205 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 NOTUMQ6P988 496 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC27A1Q6PCB7 646 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 SYT10Q6XYQ8 523 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 CATSPER4Q7RTX7 472 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 SYT9Q86SS6 491 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 RPAINQ86UA6 219 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 SESTD1Q86VW0 696 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF677Q86XU0 584 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 THNSL1Q8IYQ7 743 aa4.26□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM71AQ8IYT1 594 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms