RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CLSTN1O94985 981 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 STAU1O95793 577 aaKnown RBP20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 HLA-DRAP01903 254 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 ATICP31939 592 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 PUS10Q3MIT2 529 aaKnown RBP20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 WDR72Q3MJ13 1102 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 TJAP1Q5JTD0 557 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 ELMSAN1Q6PJG2 1045 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 FRMD5Q7Z6J6 570 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 OR10T2Q8NGX3 314 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 MMS19Q96T76 1030 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 OXCT2Q9BYC2 517 aaPredicted RBP20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 ADAM7Q9H2U9 754 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 TMEM8AQ9HCN3 771 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 POLIQ9UNA4 740 aa20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 USP15Q9Y4E8 981 aaPredicted RBP20.9■□□□□ 0.94
SEMA3B-206ENST00000439487 MYH10P35580 1976 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 CCDC195A0A1B0GUA6 201 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 GTF2H1P32780 548 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 PIK3CAP42336 1068 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 TNNC1P63316 161 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 ZNF699Q32M78 642 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 LIN9Q5TKA1 542 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 CES5AQ6NT32 575 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 RNF19BQ6ZMZ0 732 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 LIMS2Q7Z4I7 341 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 ADGRF2Q8IZF7 708 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 TMEM86AQ8N2M4 240 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 METTL14Q9HCE5 456 aaKnown RBP20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 NXF1Q9UBU9 619 aaKnown RBP20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 DACH1Q9UI36 760 aa20.89■□□□□ 0.93
SEMA3B-206ENST00000439487 NOTCH4Q99466 2003 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 DENND4AQ7Z401 1863 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 STX10O60499 249 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 ZMYND10O75800 440 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 SEC24AO95486 1093 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 C8AP07357 584 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 ATF2P15336 505 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 CDR1P51861 262 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 ITIH3Q06033 890 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 ADCY1Q08828 1119 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 SGSM1Q2NKQ1 1148 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 ZNF667Q5HYK9 610 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 TPGS2Q68CL5 300 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 KRT39Q6A163 491 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 SPOPLQ6IQ16 392 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 CAVIN1Q6NZI2 390 aaKnown RBP20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 SASS6Q6UVJ0 657 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 DPH6Q7L8W6 267 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 SLC7A14Q8TBB6 771 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 TAS1R2Q8TE23 839 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 KBTBD7Q8WVZ9 684 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 SUSD6Q92537 303 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 PGLYRP2Q96PD5 576 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 PI4K2AQ9BTU6 479 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 ZCWPW1Q9H0M4 648 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 VRTNQ9H8Y1 702 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 DDX43Q9NXZ2 648 aaKnown RBP20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 AFF4Q9UHB7 1163 aaKnown RBP20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 MYO10Q9HD67 2058 aa20.88■□□□□ 0.93
SEMA3B-206ENST00000439487 PTPRDP23468 1912 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 HCRTO43612 131 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 LRRN2O75325 713 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 FGFR1OPO95684 399 aaKnown RBP20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 ACAT1P24752 427 aaKnown RBP20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 ERCC5P28715 1186 aaPredicted RBP20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 ELF1P32519 619 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 MXI1P50539 228 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 MYL7Q01449 175 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 GPR17Q13304 367 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 SMAD2Q15796 467 aaKnown RBP20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 PPM1LQ5SGD2 360 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 GPR149Q86SP6 731 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 LRRTM3Q86VH5 581 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 CMASQ8NFW8 434 aaPredicted RBP20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 SLC35C1Q96A29 364 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 MRPL45Q9BRJ2 306 aaKnown RBP20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 CYP4F11Q9HBI6 524 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 ZDHHC7Q9NXF8 308 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 FAM50BQ9Y247 325 aa20.87■□□□□ 0.93
SEMA3B-206ENST00000439487 TTC28Q96AY4 2481 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 DOCK8Q8NF50 2099 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 PRRG1O14668 218 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 GABRDO14764 452 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 VNN2O95498 520 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 GNA14O95837 355 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 ASS1P00966 412 aaKnown RBP20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 WARSP23381 471 aaKnown RBP20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 LHX1P48742 406 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 TPD52L1Q16890 204 aaPredicted RBP20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 UVSSAQ2YD98 709 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 CBWD6Q4V339 395 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 SLC39A12Q504Y0 691 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 CBWD3Q5JTY5 395 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 CBWD5Q5RIA9 395 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 SCARA5Q6ZMJ2 495 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 CCDC149Q6ZUS6 474 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 SPATA18Q8TC71 538 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 TAF4BQ92750 862 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms