RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 NMD3Q96D46 503 aaKnown RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF503Q96F45 646 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 P2RX7Q99572 595 aaKnown RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 TLR10Q9BXR5 811 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 UNKQ9C0B0 810 aaKnown RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 A1CFQ9NQ94 594 aaKnown RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 MYRFQ9Y2G1 1151 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 PCDHGB6Q9Y5F9 930 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 SNX13Q9Y5W8 968 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 AATKQ6ZMQ8 1374 aa4.65□□□□□ -1.66
LSM1P1-201ENST00000438629 PRAMEF33A0A0G2JMD5 474 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 A0A1W2PS29 197 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 TMEM200CA6NKL6 621 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 E9PLN8 166 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 TBX3O15119 743 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 PMM2O15305 246 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 PRAMEF10O60809 474 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 DNAJB5O75953 348 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 CDKL5O76039 1030 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 KIF20AO95235 890 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 C1SP09871 688 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 ATXN1LP0C7T5 689 aaKnown RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 FDXRP22570 491 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 VIPR2P41587 438 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 ANXA11P50995 505 aaKnown RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 AK2P54819 239 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 WNT3P56703 355 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC25A3Q00325 362 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 GUCY1B3Q02153 619 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 FPGSQ05932 587 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 DYRK1AQ13627 763 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 HLXQ14774 488 aaPredicted RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 IQCB1Q15051 598 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 LONRF3Q496Y0 759 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 SP5Q6BEB4 398 aaPredicted RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 TAPT1Q6NXT6 567 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 LAYNQ6UX15 382 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 LRRC55Q6ZSA7 311 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 PPP1R32Q7Z5V6 425 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 DPP9Q86TI2 863 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 SDR16C5Q8N3Y7 309 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 CPEB3Q8NE35 698 aaKnown RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 FAM46DQ8NEK8 389 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 CACTINQ8WUQ7 758 aaKnown RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 IPCEF1Q8WWN9 437 aaPredicted RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 RNF31Q96EP0 1072 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 ZC3H10Q96K80 434 aaKnown RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 MSLNLQ96KJ4 702 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 TNIP3Q96KP6 325 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 NELL2Q99435 816 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 VKORC1Q9BQB6 163 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 ZSWIM1Q9BR11 485 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 SPATA5L1Q9BVQ7 753 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 ALOXE3Q9BYJ1 711 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 ZNF768Q9H5H4 540 aaKnown RBP4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 SACM1LQ9NTJ5 587 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 HSFX1Q9UBD0 423 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 XPR1Q9UBH6 696 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 CPNE7Q9UBL6 633 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 RAD54BQ9Y620 910 aa4.65□□□□□ -1.67
LSM1P1-201ENST00000438629 A0A087WWL8 130 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 TRIM43BA6NCK2 446 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 TOR1BO14657 336 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 TRIAP1O43715 76 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 EIF5BO60841 1220 aaKnown RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 ELANEP08246 267 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 ITGALP20701 1170 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC11A2P49281 568 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 PTTG1IPP53801 180 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 UCP3P55916 312 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 BLOC1S1P78537 153 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 CTBP1Q13363 440 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 OS9Q13438 667 aaPredicted RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 UBE4AQ14139 1066 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 LSM12Q3MHD2 195 aaKnown RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 LY6G5CQ5SRR4 150 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 B3GNTL1Q67FW5 361 aaPredicted RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 SFRP4Q6FHJ7 346 aaPredicted RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 MICALCLQ6ZW33 695 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 KRTAP1-3Q8IUG1 177 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC15A4Q8N697 577 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 CELF5Q8N6W0 485 aaKnown RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 DNAJC5GQ8N7S2 189 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 Q8NA96 180 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 FUBP1Q96AE4 644 aaKnown RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 TRIM43Q96BQ3 446 aaPredicted RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 TEX101Q9BY14 249 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 NRDE2Q9H7Z3 1164 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 PNPLA8Q9NP80 782 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 SERHLQ9NQF3 203 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 INTS13Q9NVM9 706 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 ETAA1Q9NY74 926 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 CTTNBP2NLQ9P2B4 639 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 HESX1Q9UBX0 185 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 RGS17Q9UGC6 210 aaPredicted RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 AGAP1Q9UPQ3 857 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 SHOC2Q9UQ13 582 aa4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 REXO2Q9Y3B8 237 aaKnown RBP4.64□□□□□ -1.67
LSM1P1-201ENST00000438629 NCANO14594 1321 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms