RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SYCP2LQ5T4T6 812 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 RSBN1LQ6PCB5 846 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 ACSF2Q96CM8 615 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 ACAP3Q96P50 834 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 TEX13BQ9BXU2 312 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 NEUROG2Q9H2A3 272 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 AVENQ9NQS1 362 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 MAGED2Q9UNF1 606 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 NFIBO00712 420 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 WEE2P0C1S8 567 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 PDGFRAP16234 1089 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 BRD2P25440 801 aaKnown RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 MMP13P45452 471 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 COG7P83436 770 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 GCNT1Q02742 428 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 GABPAQ06546 454 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 OVGP1Q12889 678 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 QPCTQ16769 361 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 TFDP3Q5H9I0 405 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 DDX27Q96GQ7 796 aaKnown RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 SLC24A2Q9UI40 661 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 ENO4A6NNW6 628 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 B2RBV5 119 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 APOL1O14791 398 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 SNRPAP09012 282 aaKnown RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 CAP2P40123 477 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 PHKA2P46019 1235 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 ERFP50548 548 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 ALDH5A1P51649 535 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 ART3Q13508 389 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 PTK6Q13882 451 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 DNAL1Q4LDG9 190 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 FAM47CQ5HY64 1035 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 PCNX4Q63HM2 1172 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 SPOPLQ6IQ16 392 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 KIRREL3Q8IZU9 778 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 TTC39CQ8N584 583 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 CKAP2Q8WWK9 683 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 GPRASP2Q96D09 838 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 LRGUKQ96M69 825 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 GCOM2Q9BZD3 368 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 DHX35Q9H5Z1 703 aaKnown RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 RSAD1Q9HA92 442 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 AGO4Q9HCK5 861 aaKnown RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 ACP6Q9NPH0 428 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 HEY2Q9UBP5 337 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 MARCOQ9UEW3 520 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 PABPN1LA6NDY0 278 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 PIK3CDO00329 1044 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SRGAP2BP0DMP2 458 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SLURP2P0DP57 97 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 TYK2P29597 1187 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 HMGCS2P54868 508 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 IRX1P78414 480 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 DDR1Q08345 913 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 STX3Q13277 289 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 HIC1Q14526 733 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SLC35G1Q2M3R5 365 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 RGS9BPQ6ZS82 235 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 PAXIP1Q6ZW49 1069 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 FAM71AQ8IYT1 594 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 HACE1Q8IYU2 909 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ABRAQ8N0Z2 381 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 FAM71DQ8N9W8 422 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 LRRC19Q9H756 370 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CYP4F11Q9HBI6 524 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 PAK5Q9P286 719 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 C15orf41Q9Y2V0 281 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 GRIN2DO15399 1336 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 MYH2Q9UKX2 1941 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 KPNA7A9QM74 516 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 POLRMTO00411 1230 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 DNALI1O14645 258 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 VHLP40337 213 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ALDH18A1P54886 795 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CYP4A22Q5TCH4 519 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SPOCD1Q6ZMY3 1216 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 EXOC3L1Q86VI1 746 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CERS5Q8N5B7 392 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 GSDMBQ8TAX9 411 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SYTL5Q8TDW5 730 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SLC26A7Q8TE54 656 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SHC3Q92529 594 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ART4Q93070 314 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 PPWD1Q96BP3 646 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CCDC124Q96CT7 223 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 FAM111AQ96PZ2 611 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM121Q9BTD3 319 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 WDR18Q9BV38 432 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 DCLRE1BQ9H816 532 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ERVK-5Q9HDB9 667 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 KLHL8Q9P2G9 620 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 THEGQ9P2T0 379 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SHOC2Q9UQ13 582 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 TRIM49D1C9J1S8 452 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 DDX3YO15523 660 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 GSTA2P09210 222 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ZFXP17010 805 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 STIP1P31948 543 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms