RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 ZNF699Q32M78 642 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 KATNAL2Q8IYT4 538 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 PRPF31Q8WWY3 499 aaKnown RBP17.68■□□□□ 0.42
TTC3-209ENST00000438055 PORCNQ9H237 461 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 ZNF214Q9UL59 606 aaPredicted RBP17.68■□□□□ 0.42
TTC3-209ENST00000438055 CALB1P05937 261 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 FASTKD3Q14CZ7 662 aaKnown RBP17.68■□□□□ 0.42
TTC3-209ENST00000438055 LACTB2Q53H82 288 aaPredicted RBP17.68■□□□□ 0.42
TTC3-209ENST00000438055 CALN1Q9BXU9 219 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 TRABDQ9H4I3 376 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 ELF3P78545 371 aaPredicted RBP17.68■□□□□ 0.42
TTC3-209ENST00000438055 BBS9Q3SYG4 887 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 FAM182AQ5T1J6 154 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 ANKS1BQ7Z6G8 1248 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 CISHQ9NSE2 258 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.68■□□□□ 0.422e-9■□□□□ 8.8
TTC3-209ENST00000438055 PNMA3Q9UL41 463 aa17.68■□□□□ 0.42
TTC3-209ENST00000438055 FAM47DPA6NHR8 397 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 IGF2BP3O00425 579 aaKnown RBP eCLIP17.67■□□□□ 0.42
TTC3-209ENST00000438055 KCNJ2P63252 427 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 TXNRD3NBQ6F5E7 133 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 RHBDF2Q6PJF5 856 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 DEFB132Q7Z7B7 95 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 TRIM50Q86XT4 487 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 ZBTB8OSQ8IWT0 167 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 HAPLN2Q9GZV7 340 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 NOD2Q9HC29 1040 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 HOXC10Q9NYD6 342 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 GOLGA8RI6L899 631 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 ACO1P21399 889 aaKnown RBP17.67■□□□□ 0.42
TTC3-209ENST00000438055 C1QBPQ07021 282 aaKnown RBP17.67■□□□□ 0.42
TTC3-209ENST00000438055 CRELD2Q6UXH1 353 aaPredicted RBP17.67■□□□□ 0.42
TTC3-209ENST00000438055 RHPN2Q8IUC4 686 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 FBF1Q8TES7 1133 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 PIK3R2O00459 728 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 IGBP1P78318 339 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 SPOCD1Q6ZMY3 1216 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 CENPUQ71F23 418 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 EMC1Q8N766 993 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 LRRC8CQ8TDW0 803 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 CKAP2Q8WWK9 683 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 SLCO2A1Q92959 643 aa17.67■□□□□ 0.42
TTC3-209ENST00000438055 KLF6Q99612 283 aaPredicted RBP17.67■□□□□ 0.42
TTC3-209ENST00000438055 TTLL13PA6NNM8 815 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 SLC8A1P32418 973 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 ABCD1P33897 745 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 IRX3P78415 501 aaPredicted RBP17.66■□□□□ 0.42
TTC3-209ENST00000438055 BASP1P80723 227 aaKnown RBP17.66■□□□□ 0.42
TTC3-209ENST00000438055 XRCC4Q13426 336 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 DUOXA2Q1HG44 320 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 PLEKHA7Q6IQ23 1121 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 CEP128Q6ZU80 1094 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 HSPH1Q92598 858 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 AGAP1Q9UPQ3 857 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 SPATA31C2B4DYI2 1134 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 DNAJC8O75937 253 aaPredicted RBP17.66■□□□□ 0.42
TTC3-209ENST00000438055 TNNC2P02585 160 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 RTP1P59025 263 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 CAPSQ13938 189 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 MAPK6Q16659 721 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 RFX6Q8HWS3 928 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 PALM2Q8IXS6 379 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 PYROXD1Q8WU10 500 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 SLITRK1Q96PX8 696 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 PGAP2Q9UHJ9 254 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 TRIM33Q9UPN9 1127 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 UTRNP46939 3433 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 LIASO43766 372 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 STBD1O95210 358 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 RAP1GAPP47736 663 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 PSMC1P62191 440 aaKnown RBP17.66■□□□□ 0.42
TTC3-209ENST00000438055 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
TTC3-209ENST00000438055 FAM160B1Q5W0V3 765 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 ZNF449Q6P9G9 518 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 C15orf39Q6ZRI6 1047 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 TMEM174Q8WUU8 243 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 MRPL4Q9BYD3 311 aaKnown RBP17.66■□□□□ 0.42
TTC3-209ENST00000438055 IKBKGQ9Y6K9 419 aa17.66■□□□□ 0.42
TTC3-209ENST00000438055 A0A0B4J269 797 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 CST8O60676 142 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 ATP4AP20648 1035 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 WDR72Q3MJ13 1102 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 SWT1Q5T5J6 900 aaKnown RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 PHF13Q86YI8 300 aaPredicted RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 CCHCR1Q8TD31 782 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 SPOCK2Q92563 424 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 NIF3L1Q9GZT8 377 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 ALG13Q9NP73 1137 aaKnown RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 L3MBTL1Q9Y468 752 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 TP73O15350 636 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 CSDE1O75534 798 aaKnown RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 KRT3P12035 628 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 TCF7P36402 384 aaPredicted RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 NEDD9Q14511 834 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 SPARCL1Q14515 664 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 ETNK1Q9HBU6 452 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 DNALI1O14645 258 aaPredicted RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 ATP6V1G2O95670 118 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 PRKCBP05771 671 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms