RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 SEL1L2Q5TEA6 688 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 TWF2Q6IBS0 349 aaKnown RBP16.33■□□□□ 0.2
SGCE-205ENST00000437425 FAM43BQ6ZT52 329 aaPredicted RBP16.33■□□□□ 0.2
SGCE-205ENST00000437425 UNC93AQ86WB7 457 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 SLAIN1Q8ND83 568 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 CD101Q93033 1021 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 NT5C1AQ9BXI3 368 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
SGCE-205ENST00000437425 GOLPH3Q9H4A6 298 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 NXF3Q9H4D5 531 aaKnown RBP16.33■□□□□ 0.2
SGCE-205ENST00000437425 SLITRK6Q9H5Y7 841 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 RBM12Q9NTZ6 932 aaKnown RBP16.33■□□□□ 0.2
SGCE-205ENST00000437425 SLC38A7Q9NVC3 462 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 IP6K2Q9UHH9 426 aa16.33■□□□□ 0.2
SGCE-205ENST00000437425 NOC2LQ9Y3T9 749 aaKnown RBP16.33■□□□□ 0.2
SGCE-205ENST00000437425 TRPA1O75762 1119 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 CD19P15391 556 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 BRD2P25440 801 aaKnown RBP16.32■□□□□ 0.2
SGCE-205ENST00000437425 TNFRSF8P28908 595 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 GSCP56915 257 aaPredicted RBP16.32■□□□□ 0.2
SGCE-205ENST00000437425 RWDD2BP57060 319 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 SNX16P57768 344 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 PTP4A2Q12974 167 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 ZNF394Q53GI3 561 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 SGO2Q562F6 1265 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 ERICH1Q86X53 443 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 PASD1Q8IV76 773 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 EIF1ADQ8N9N8 165 aaKnown RBP16.32■□□□□ 0.2
SGCE-205ENST00000437425 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.32■□□□□ 0.2
SGCE-205ENST00000437425 RNPC3Q96LT9 517 aaKnown RBP16.32■□□□□ 0.2
SGCE-205ENST00000437425 PNKPQ96T60 521 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 C11orf70Q9BRQ4 267 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 TRAIPQ9BWF2 469 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 SMYD3Q9H7B4 428 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 SAGE1Q9NXZ1 904 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 STIM2Q9P246 746 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 IPPQ9Y573 584 aa16.32■□□□□ 0.2
SGCE-205ENST00000437425 SMIM28A0A1B0GU29 152 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 KRIT1O00522 736 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 ATMINO43313 823 aaPredicted RBP16.31■□□□□ 0.2
SGCE-205ENST00000437425 PROSCO94903 275 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 ZRANB2O95218 330 aaKnown RBP eCLIP16.31■□□□□ 0.2
SGCE-205ENST00000437425 SKIP12755 728 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 ELNP15502 786 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 RAB27AP51159 221 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 MGAT3Q09327 533 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 TRIM32Q13049 653 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 MAMLD1Q13495 774 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 PTGISQ16647 500 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 SV2CQ496J9 727 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 C9orf57Q5W0N0 161 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 MAATS1Q7Z4T9 603 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 IFT20Q8IY31 132 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 SLC4A11Q8NBS3 891 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 CCDC26Q8TAB7 109 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 FEZF2Q8TBJ5 459 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 CD99L2Q8TCZ2 262 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 MAIP1Q8WWC4 291 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 ZMAT2Q96NC0 199 aaKnown RBP16.31■□□□□ 0.2
SGCE-205ENST00000437425 RUNDC3BQ96NL0 473 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 EPC1Q9H2F5 836 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 GDAP2Q9NXN4 497 aa16.31■□□□□ 0.2
SGCE-205ENST00000437425 TMEM110-MUSTN1A8MSY1 372 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 PIRO00625 290 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 PSTPIP1O43586 416 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 PAX3P23760 479 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 PEX5P50542 639 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 VSNL1P62760 191 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 LONRF2Q1L5Z9 754 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 FAM26DQ5JW98 314 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 FBXO47Q5MNV8 452 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 SCARA3Q6AZY7 606 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 DNAJC24Q6P3W2 148 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 DPH6Q7L8W6 267 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 C3orf20Q8ND61 904 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 WHAMMQ8TF30 809 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 GLT1D1Q96MS3 346 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 SDCBP2Q9H190 292 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 MTUS1Q9ULD2 1270 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 ST3GAL5Q9UNP4 418 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 NOD1Q9Y239 953 aa16.3■□□□□ 0.2
SGCE-205ENST00000437425 TRIP12Q14669 1992 aaPredicted RBP16.3■□□□□ 0.2
SGCE-205ENST00000437425 FKTNO75072 461 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 CALCAP01258 141 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 FGGP02679 453 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 SETSIPP0DME0 302 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 LRPAP1P30533 357 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 TAF6P49848 677 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 CDH8P55286 799 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 ITGA7Q13683 1181 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 HDXQ7Z353 690 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
SGCE-205ENST00000437425 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
SGCE-205ENST00000437425 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 TFAP2BQ92481 460 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 HEXIM2Q96MH2 286 aaKnown RBP16.29■□□□□ 0.2
SGCE-205ENST00000437425 LRRC1Q9BTT6 524 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms