RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 TJP3O95049 919 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 LMNAP02545 664 aaKnown RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 ASNSP08243 561 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 NAT1P18440 290 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 RARRES1P49788 294 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 USP4Q13107 963 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 C2CD6Q53TS8 623 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 IZUMO3Q5VZ72 239 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 CLNKQ7Z7G1 428 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 SEMA4DQ92854 862 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 KREMEN1Q96MU8 473 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 RBM15Q96T37 977 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 GMLQ99445 158 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 UBE2OQ9C0C9 1292 aaKnown RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 C12orf65Q9H3J6 166 aaKnown RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 KIAA1586Q9HCI6 787 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 ALG13Q9NP73 1137 aaKnown RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 TCEAL9Q9UHQ7 104 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 DHX15O43143 795 aaKnown RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 RFX1P22670 979 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 PTGER2P43116 358 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 QARSP47897 775 aaKnown RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 DGKZQ13574 1117 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 RASA3Q14644 834 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 STAT4Q14765 748 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 TKFCQ3LXA3 575 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 APLFQ8IW19 511 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 WDR60Q8WVS4 1066 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 MAIP1Q8WWC4 291 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 MCUR1Q96AQ8 359 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-202ENST00000437003 SMC6Q96SB8 1091 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 OCEL1Q9H607 264 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 SAYSD1Q9NPB0 183 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 ARL8BQ9NVJ2 186 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 WASF2Q9Y6W5 498 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 ZNF536O15090 1300 aa13.06□□□□□ -0.32
TMEM116-202ENST00000437003 A0A1W2PPM1 405 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 TCEA3O75764 348 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 KRT5P13647 590 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 PLS3P13797 630 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 EIF2AK2P19525 551 aaKnown RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 GSTT1P30711 240 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 GJC1P36383 396 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 MAGEA4P43358 317 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 MTMR1Q13613 665 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 PTK6Q13882 451 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 PDK4Q16654 411 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 UGCGQ16739 394 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 RASIP1Q5U651 963 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 ZNF365Q70YC5 407 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 KBTBD2Q8IY47 623 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 VPS52Q8N1B4 723 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 RFWD2Q8NHY2 731 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 PSPC1Q8WXF1 523 aaKnown RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 STMN2Q93045 179 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 KAT6AQ92794 2004 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 FSCN2O14926 492 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 GYG2O15488 501 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 YWHABP31946 246 aaKnown RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 NEK3P51956 506 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 SOX10P56693 466 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 SPP2Q13103 211 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 ALCAMQ13740 583 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 FASTKD3Q14CZ7 662 aaKnown RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 LRRC23Q53EV4 343 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 ZFYVE27Q5T4F4 411 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 LVRNQ6Q4G3 990 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 DENND1AQ8TEH3 1009 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 RBM41Q96IZ5 413 aaKnown RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 PI4K2AQ9BTU6 479 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 DEFB129Q9H1M3 183 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 AGO4Q9HCK5 861 aaKnown RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 EURLQ9NYK6 297 aa13.05□□□□□ -0.32
TMEM116-202ENST00000437003 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM116-202ENST00000437003 MAGEB2O15479 319 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 PSMG1O95456 288 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 ETS2P15036 469 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 GCAP28676 217 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 PIK3CAP42336 1068 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 MRPS9P82933 396 aaKnown RBP13.04□□□□□ -0.32
TMEM116-202ENST00000437003 FMO1Q01740 532 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 SLC34A1Q06495 639 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 SNRNP35Q16560 246 aaKnown RBP13.04□□□□□ -0.32
TMEM116-202ENST00000437003 GSTA5Q7RTV2 222 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 MCF2L2Q86YR7 1114 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 PPFIBP2Q8ND30 876 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 CLEC4DQ8WXI8 215 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 TRAPPC9Q96Q05 1148 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 DCLK3Q9C098 648 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 FBXO6Q9NRD1 293 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-202ENST00000437003 ANAPC7Q9UJX3 599 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 ACTL7BQ9Y614 415 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 TRAFD1O14545 582 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-202ENST00000437003 CPA2P48052 419 aa13.04□□□□□ -0.32
TMEM116-202ENST00000437003 MAPK6Q16659 721 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms