RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 A0A1W2PQJ5 194 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 AKR1B15C9JRZ8 316 aaPredicted RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 PTGESO14684 152 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 MFAP3LO75121 409 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 ZIC2O95409 532 aaPredicted RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 HLA-DRAP01903 254 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 UCHL3P15374 230 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 TRIM21P19474 475 aaKnown RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 RFC2P35250 354 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 GUCY2FP51841 1108 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 ADKP55263 362 aaKnown RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 MYL6P60660 151 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 POLR2FP61218 127 aaKnown RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 CETN1Q12798 172 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 LRMPQ12912 555 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 BIRC3Q13489 604 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 TRIM14Q14142 442 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 TMEM132DQ14C87 1099 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 GLRA4Q5JXX5 417 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 ZNF697Q5TEC3 545 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 IQCEQ6IPM2 695 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 FAM43BQ6ZT52 329 aaPredicted RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 DEFB128Q7Z7B8 93 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 PPFIBP1Q86W92 1011 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 NT5DC4Q86YG4 428 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 ARHGEF19Q8IW93 802 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 CRIPAKQ8N1N5 446 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 C1orf127Q8N9H9 656 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 TC2NQ8N9U0 490 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 NEK11Q8NG66 645 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 CACTINQ8WUQ7 758 aaKnown RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 APBB2Q92870 758 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 C18orf25Q96B23 403 aaPredicted RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 ZFP42Q96MM3 310 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 FRMD6Q96NE9 622 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 GAD1Q99259 594 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 PI4K2AQ9BTU6 479 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 NAA15Q9BXJ9 866 aaKnown RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 FTHL17Q9BXU8 183 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 EDEM3Q9BZQ6 932 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 XYLT2Q9H1B5 865 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 PRDM5Q9NQX1 630 aaPredicted RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 METTL5Q9NRN9 209 aaKnown RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 C1orf112Q9NSG2 853 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 MIOSQ9NXC5 875 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 TUBGCP4Q9UGJ1 667 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 SIX4Q9UIU6 781 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 FBXL5Q9UKA1 691 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 PLAGL2Q9UPG8 496 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 GIT1Q9Y2X7 761 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 FHOD1Q9Y613 1164 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 GPC6Q9Y625 555 aaPredicted RBP7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 ARL5CA6NH57 179 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 GOLGA6L6A8MZA4 724 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 INPPL1O15357 1258 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 ZC3H11AO75152 810 aaKnown RBP eCLIP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 PHACTR2O75167 634 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 OFD1O75665 1012 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 EOMESO95936 686 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 TNNC2P02585 160 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 ITGB3P05106 788 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 PTMAP06454 111 aaKnown RBP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 TMEM191BP0C7N4 346 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 CSF2RAP15509 400 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 RAG1P15918 1043 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 KRT9P35527 623 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 MLH1P40692 756 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 PIK3CAP42336 1068 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 WDR4P57081 412 aaKnown RBP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 GSDMDP57764 484 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 ZBED6P86452 979 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 SOX4Q06945 474 aaPredicted RBP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 NAB2Q15742 525 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 SGSM1Q2NKQ1 1148 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 SPOPLQ6IQ16 392 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 MFSD5Q6N075 450 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 RRAGAQ7L523 313 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 LRRC8AQ8IWT6 810 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 HACE1Q8IYU2 909 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 RNF169Q8NCN4 708 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 KAT5Q92993 513 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 PGBD4Q96DM1 585 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 IQCDQ96DY2 449 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 ABHD8Q96I13 439 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 ANKRD36BP1Q96IX9 119 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 ZNF830Q96NB3 372 aaPredicted RBP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 PPP1R10Q96QC0 940 aaKnown RBP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 TSPAN18Q96SJ8 248 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 DNAJC7Q99615 494 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 ELAC1Q9H777 363 aaKnown RBP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 APOBEC3GQ9HC16 384 aaKnown RBP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 NLRC4Q9NPP4 1024 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 DPP3Q9NY33 737 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 CEP72Q9P209 647 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 APEX2Q9UBZ4 518 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 DNAJC12Q9UKB3 198 aa7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 LUC7L2Q9Y383 392 aaKnown RBP7.56□□□□□ -1.2
LSM3P3-201ENST00000436601 NUB1Q9Y5A7 615 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms