RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 PABPC1LQ4VXU2 614 aaKnown RBP17.47■□□□□ 0.39
SMPD4-207ENST00000435455 TMEM31Q5JXX7 168 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 ZNF658Q5TYW1 1059 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-207ENST00000435455 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 GET4Q7L5D6 327 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-207ENST00000435455 DPH6Q7L8W6 267 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 DCP1BQ8IZD4 617 aaKnown RBP17.47■□□□□ 0.39
SMPD4-207ENST00000435455 PDCL2Q8N4E4 241 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 TOP6BLQ8N6T0 577 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 OR10T2Q8NGX3 314 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 TMC2Q8TDI7 906 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 MYADMQ96S97 322 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 RTP3Q9BQQ7 232 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 ZCWPW1Q9H0M4 648 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-207ENST00000435455 AVENQ9NQS1 362 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-207ENST00000435455 HCFC1R1Q9NWW0 138 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 EPS15L1Q9UBC2 864 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 DNMT3BQ9UBC3 853 aaKnown RBP17.47■□□□□ 0.39
SMPD4-207ENST00000435455 HSFX1Q9UBD0 423 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 SORCS3Q9UPU3 1222 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 MTMR11A4FU01 709 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 PHACTR2O75167 634 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 LHX1P48742 406 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 CLDN10P78369 228 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 NTHL1P78549 312 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 ZXDAP98168 799 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 MYL7Q01449 175 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 TSPY1Q01534 308 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 TRPC3Q13507 836 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 SLC39A12Q504Y0 691 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 ZCWPW2Q504Y3 356 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 CENPPQ6IPU0 288 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 SMYD4Q8IYR2 804 aaPredicted RBP17.46■□□□□ 0.39
SMPD4-207ENST00000435455 PLEKHO2Q8TD55 490 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 C2orf15Q8WU43 125 aaKnown RBP17.46■□□□□ 0.39
SMPD4-207ENST00000435455 ZNF516Q92618 1163 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 ZNF512Q96ME7 567 aaPredicted RBP17.46■□□□□ 0.39
SMPD4-207ENST00000435455 TMEM209Q96SK2 561 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 YIPF1Q9Y548 306 aa17.46■□□□□ 0.39
SMPD4-207ENST00000435455 TECTAO75443 2155 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 LRRIQ3A6PVS8 624 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-207ENST00000435455 VNN2O95498 520 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 STAU1O95793 577 aaKnown RBP17.45■□□□□ 0.38
SMPD4-207ENST00000435455 RHOP08100 348 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 PCSK1P29120 753 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 ATICP31939 592 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 PRCPP42785 496 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 ALDH1A3P47895 512 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 TWF1Q12792 350 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 DUSP4Q13115 394 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 ADAM9Q13443 819 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 BIRC3Q13489 604 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 STIM1Q13586 685 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 SOWAHAQ2M3V2 549 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 SCARA3Q6AZY7 606 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 IQCEQ6IPM2 695 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 LIMS2Q7Z4I7 341 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 FAM186BQ8IYM0 893 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 UBALD2Q8IYN6 164 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 ADGRF2Q8IZF7 708 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 ATAD1Q8NBU5 361 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 SPPL2BQ8TCT7 592 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-207ENST00000435455 NXPE3Q969Y0 559 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-207ENST00000435455 ACBD6Q9BR61 282 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 IGSF9Q9P2J2 1179 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 CDH7Q9ULB5 785 aa17.45■□□□□ 0.38
SMPD4-207ENST00000435455 ZNF197O14709 1029 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 IKBKBO14920 756 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 CST3P01034 146 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-207ENST00000435455 ASGR2P07307 311 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 FAM163BP0C2L3 166 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 LAMP2P13473 410 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 KRT13P13646 458 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 PSMC2P35998 433 aaKnown RBP17.44■□□□□ 0.38
SMPD4-207ENST00000435455 TUFMP49411 452 aaKnown RBP17.44■□□□□ 0.38
SMPD4-207ENST00000435455 EPHB3P54753 998 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 ENPEPQ07075 957 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 NFE2Q16621 373 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-207ENST00000435455 INTS8Q75QN2 995 aaKnown RBP17.44■□□□□ 0.38
SMPD4-207ENST00000435455 LEMD2Q8NC56 503 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 TSG101Q99816 390 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 CORO1BQ9BR76 489 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 DDX43Q9NXZ2 648 aaKnown RBP17.44■□□□□ 0.38
SMPD4-207ENST00000435455 MRPS23Q9Y3D9 190 aaKnown RBP17.44■□□□□ 0.38
SMPD4-207ENST00000435455 ASB3Q9Y575 518 aa17.44■□□□□ 0.38
SMPD4-207ENST00000435455 PRR33A8MZF0 331 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 GABRDO14764 452 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 CETN3O15182 167 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 AKAP3O75969 853 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 PPP1R2P41236 205 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 VAMP7P51809 220 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 TNNC1P63316 161 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 SIGLEC14Q08ET2 396 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 CYP4A22Q5TCH4 519 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms