RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PCDH18Q9HCL0 1135 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.84□□□□□ -1.152e-8■■■□□ 17.9
CPSF6-202ENST00000435070 ANAPC7Q9UJX3 599 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF148Q9UQR1 794 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 LZTS1Q9Y250 596 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 CCDC88AQ3V6T2 1871 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TTLL13PA6NNM8 815 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 H3BSA7 217 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 XPOTO43592 962 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TBCAO75347 108 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TFAP2AP05549 437 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 BCRP11274 1271 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 NELFEP18615 380 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 PMLP29590 882 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 CHN2P52757 468 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ZBTB17Q13105 803 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 GK3PQ14409 553 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 CC2D2BQ6DHV5 1058 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 BRD8Q9H0E9 1235 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 RANBP17Q9H2T7 1088 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 PCIF1Q9H4Z3 704 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 CYLDQ9NQC7 956 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ADAMTS6Q9UKP5 1117 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 PI4K2BG5E9Z4 385 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 FGRP09769 529 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 POLD1P28340 1107 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ATXN3P54252 364 aaPredicted RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 CYP1B1Q16678 543 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 PPP4R3CPQ6ZMV5 832 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 NLRX1Q86UT6 975 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TMPRSS6Q8IU80 811 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 GSDMBQ8TAX9 411 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TUBB6Q9BUF5 446 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ACTL7BQ9Y614 415 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 E5RJQ4 531 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 BMP3P12645 472 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ACTR3P61158 418 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 FOLH1Q04609 750 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 CYTH1Q15438 398 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 MYLK3Q32MK0 819 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TRMT5Q32P41 509 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 SYCP2LQ5T4T6 812 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 SUSD4Q5VX71 490 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 FBXL19Q6PCT2 694 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 NANOGNBQ7Z5D8 188 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 DHDDSQ86SQ9 333 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 SEPT12Q8IYM1 358 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 FHDC1Q9C0D6 1143 aaPredicted RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 APEX2Q9UBZ4 518 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 SLIT3O75094 1523 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 LSM1O15116 133 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 HLA-DOAP06340 250 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ANXA13P27216 316 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 GTF2H1P32780 548 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 STT3AP46977 705 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 MYL7Q01449 175 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 PICALMQ13492 652 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TCHHL1Q5QJ38 904 aaPredicted RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 C11orf63Q6NUN7 778 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 RNF111Q6ZNA4 994 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 PDSS2Q86YH6 399 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 LRRC47Q8N1G4 583 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 NSUN4Q96CB9 384 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TTC25Q96NG3 672 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ASTN1O14525 1302 aa7.84□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L15C9J2P7 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L13C9JLJ4 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L11C9JVI0 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L18D6R9N7 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L22D6RA61 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L17D6RBQ6 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L19D6RCP7 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L20D6RJB6 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PCP11498 1178 aaKnown RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 MTTPP55157 894 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 IRX4P78413 519 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PDE1BQ01064 536 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L24Q0WX57 530 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 RALGPS1Q5JS13 557 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L6PQ6QN14 398 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PPM1KQ8N3J5 372 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 MYCT1Q8N699 235 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 METTL25Q8N6Q8 603 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 MECRQ9BV79 373 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 DCLK3Q9C098 648 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 GPR88Q9GZN0 384 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 ARMC7Q9H6L4 198 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 TNS3Q68CZ2 1445 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PRR5-ARHGAP8B1AHC4 643 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 BUD23O43709 281 aaKnown RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 CD58P19256 250 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 SSTR3P32745 418 aaPredicted RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 SLC16A2P36021 539 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 RPL5P46777 297 aaKnown RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 GCLMP48507 274 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 ARHGAP8P85298 464 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 GPS1Q13098 491 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 UBAP2LQ14157 1087 aaKnown RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 BTG3Q14201 252 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms