RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 FOXD4L3Q6VB84 417 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 TMC8Q8IU68 726 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 KIAA2013Q8IYS2 634 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 LINC00301Q8NCQ3 95 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 ZSWIM3Q96MP5 696 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 ZNF560Q96MR9 790 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 CHRDQ9H2X0 955 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 OBP2AQ9NY56 170 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 STYXL1Q9Y6J8 313 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 FAM186AA6NE01 2351 aa16.09■□□□□ 0.17
RPUSD3-208ENST00000433972 ANO9A1A5B4 782 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 NFICP08651 508 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 GAP43P17677 238 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 CDC25CP30307 473 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 NMT1P30419 496 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 PNPLA4P41247 253 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 VIPR2P41587 438 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 ACOT2P49753 483 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 GUCY2FP51841 1108 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 ALCAMQ13740 583 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 SV2CQ496J9 727 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 SLC39A4Q6P5W5 647 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 DNAJB7Q7Z6W7 309 aaPredicted RBP16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 SUMF1Q8NBK3 374 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 SPPL2BQ8TCT7 592 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 POMGNT1Q8WZA1 660 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 FIZ1Q96SL8 496 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 DNAJC25Q9H1X3 360 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 EPC1Q9H2F5 836 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 ATXN3LQ9H3M9 355 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 RAB23Q9ULC3 237 aa16.08■□□□□ 0.16
RPUSD3-208ENST00000433972 CYB561D2O14569 222 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 LDHAP00338 332 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 GJA1P17302 382 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 WEE1P30291 646 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 KPNA1P52294 538 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 PLCB2Q00722 1185 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 FCHO2Q0JRZ9 810 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 MTAPQ13126 283 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 PKP1Q13835 747 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 PUM1Q14671 1186 aaKnown RBP eCLIP16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 MGAT5BQ3V5L5 792 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 SLC39A12Q504Y0 691 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 ARHGAP29Q52LW3 1261 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 RRAGBQ5VZM2 374 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 POTEHQ6S545 545 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 SV2BQ7L1I2 683 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 ZNF720Q7Z2F6 126 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 DCP1BQ8IZD4 617 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 ATAD1Q8NBU5 361 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 NELL1Q92832 810 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 SEPT5Q99719 369 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 PYM1Q9BRP8 204 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 LRRC3Q9BY71 257 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 ZCWPW1Q9H0M4 648 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 MRPL44Q9H9J2 332 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 LMAN1LQ9HAT1 526 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 DPP3Q9NY33 737 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 SLC27A5Q9Y2P5 690 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 PCDHB13Q9Y5F0 798 aa16.07■□□□□ 0.16
RPUSD3-208ENST00000433972 CUTAO60888 179 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 LILRB5O75023 590 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 VNN2O95498 520 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 GABRR2P28476 465 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 ME1P48163 572 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 KRT85P78386 507 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 GRIN1Q05586 938 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 FZD5Q13467 585 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 ZC2HC1CQ53FD0 456 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 CCDC73Q6ZRK6 1079 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 DYMQ7RTS9 669 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 SFR1Q86XK3 245 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 ARID3BQ8IVW6 561 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 LRRC15Q8TF66 581 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 CACTINQ8WUQ7 758 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 EPSTI1Q96J88 318 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 ACCSQ96QU6 501 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 CRISPLD1Q9H336 500 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 THG1LQ9NWX6 298 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 GMEB2Q9UKD1 530 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 SMG5Q9UPR3 1016 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 NOTCH4Q99466 2003 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 TRIP11Q15643 1979 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 MIA3Q5JRA6 1907 aa16.06■□□□□ 0.16
RPUSD3-208ENST00000433972 GVINP1Q7Z2Y8 2422 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 KPNA7A9QM74 516 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 ANKRD63C9JTQ0 380 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 ARNTLO00327 626 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 PPEF2O14830 753 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 DDX6P26196 483 aaKnown RBP eCLIP16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 TSPY1Q01534 308 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 DNM1Q05193 864 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 NFE2Q16621 373 aaPredicted RBP16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 DGKKQ5KSL6 1271 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 GPR158Q5T848 1215 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 DGLUCYQ7Z3D6 616 aa16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 RALGPS2Q86X27 583 aaPredicted RBP16.05■□□□□ 0.16
RPUSD3-208ENST00000433972 ZNF687Q8N1G0 1237 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms