RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 ZBED2Q9BTP6 218 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 ADAM28Q9UKQ2 775 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 CEP290O15078 2479 aa28.24■■■□□ 2.11
TMEM248-205ENST00000433271 WARSP23381 471 aaKnown RBP28.24■■■□□ 2.11
TMEM248-205ENST00000433271 GNL1P36915 607 aaPredicted RBP28.24■■■□□ 2.11
TMEM248-205ENST00000433271 EIF4A3P38919 411 aaKnown RBP28.24■■■□□ 2.11
TMEM248-205ENST00000433271 NDST1P52848 882 aa28.24■■■□□ 2.11
TMEM248-205ENST00000433271 ZNF394Q53GI3 561 aa28.24■■■□□ 2.11
TMEM248-205ENST00000433271 WSCD1Q658N2 575 aa28.24■■■□□ 2.11
TMEM248-205ENST00000433271 ZNF571Q7Z3V5 609 aaPredicted RBP28.24■■■□□ 2.11
TMEM248-205ENST00000433271 EPS8L1Q8TE68 723 aa28.24■■■□□ 2.11
TMEM248-205ENST00000433271 ACP6Q9NPH0 428 aa28.24■■■□□ 2.11
TMEM248-205ENST00000433271 DSEQ9UL01 958 aa28.24■■■□□ 2.11
TMEM248-205ENST00000433271 CARNS1A5YM72 827 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 I3L4J1 428 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 CYP11A1P05108 521 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 PAEPP09466 180 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 PDE6CP51160 858 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 RAD23BP54727 409 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 OR6B3Q8NGW1 331 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 SPATA18Q8TC71 538 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 SYT11Q9BT88 431 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 NT5C1AQ9BXI3 368 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 ELOVL4Q9GZR5 314 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 SNX25Q9H3E2 840 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 MARCH5Q9NX47 278 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 HMGXB4Q9UGU5 601 aa28.23■■■□□ 2.11
TMEM248-205ENST00000433271 NOCTQ9UK39 431 aaKnown RBP28.23■■■□□ 2.11
TMEM248-205ENST00000433271 GABRDO14764 452 aa28.22■■■□□ 2.11
TMEM248-205ENST00000433271 ANXA13P27216 316 aa28.22■■■□□ 2.11
TMEM248-205ENST00000433271 SPOUT1Q5T280 376 aaKnown RBP28.22■■■□□ 2.11
TMEM248-205ENST00000433271 NOP9Q86U38 636 aaKnown RBP28.22■■■□□ 2.11
TMEM248-205ENST00000433271 TMEM176AQ96HP8 235 aa28.22■■■□□ 2.11
TMEM248-205ENST00000433271 TWNKQ96RR1 684 aa28.22■■■□□ 2.11
TMEM248-205ENST00000433271 RAD9AQ99638 391 aa28.22■■■□□ 2.11
TMEM248-205ENST00000433271 MRPL42Q9Y6G3 142 aaKnown RBP28.22■■■□□ 2.11
TMEM248-205ENST00000433271 GNA15P30679 374 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 LHX1P48742 406 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 ASTE1Q2TB18 679 aaPredicted RBP28.21■■■□□ 2.11
TMEM248-205ENST00000433271 RAD9BQ6WBX8 426 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 VPS36Q86VN1 386 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 SLC4A11Q8NBS3 891 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 DEF6Q9H4E7 631 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 PCDHB8Q9UN66 801 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 STXBP5LQ9Y2K9 1186 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 A8MXQ7 604 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 NT5C1B-RDH14C9J2C7 533 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 LAG3P18627 525 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 TYMPP19971 482 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 PBX3P40426 434 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 C9orf50Q5SZB4 431 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 KCNT2Q6UVM3 1135 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 ZNF677Q86XU0 584 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 DDX1Q92499 740 aaKnown RBP28.21■■■□□ 2.11
TMEM248-205ENST00000433271 AGPAT1Q99943 283 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 NME7Q9Y5B8 376 aa28.21■■■□□ 2.11
TMEM248-205ENST00000433271 EPN1Q9Y6I3 576 aaPredicted RBP28.21■■■□□ 2.11
TMEM248-205ENST00000433271 SF3B1O75533 1304 aaKnown RBP eCLIP28.2■■■□□ 2.14e-7■■■■■ 40.1
TMEM248-205ENST00000433271 CYLC1P35663 651 aaPredicted RBP28.2■■■□□ 2.1
TMEM248-205ENST00000433271 CDR2Q01850 454 aa28.2■■■□□ 2.1
TMEM248-205ENST00000433271 MTF1Q14872 753 aa28.2■■■□□ 2.1
TMEM248-205ENST00000433271 METTL23Q86XA0 190 aa28.2■■■□□ 2.1
TMEM248-205ENST00000433271 SLC20A1Q8WUM9 679 aa28.2■■■□□ 2.1
TMEM248-205ENST00000433271 ZNF558Q96NG5 402 aa28.2■■■□□ 2.1
TMEM248-205ENST00000433271 DNAI2Q9GZS0 605 aa28.2■■■□□ 2.1
TMEM248-205ENST00000433271 KIAA1257Q9ULG3 409 aa28.2■■■□□ 2.1
TMEM248-205ENST00000433271 TIMM13Q9Y5L4 95 aaPredicted RBP28.2■■■□□ 2.1
TMEM248-205ENST00000433271 AKR1B10O60218 316 aa28.19■■■□□ 2.1
TMEM248-205ENST00000433271 LMO2P25791 158 aa28.19■■■□□ 2.1
TMEM248-205ENST00000433271 ELAVL2Q12926 359 aaKnown RBP28.19■■■□□ 2.1
TMEM248-205ENST00000433271 OSTM1Q86WC4 334 aa28.19■■■□□ 2.1
TMEM248-205ENST00000433271 FIBCD1Q8N539 461 aa28.19■■■□□ 2.1
TMEM248-205ENST00000433271 SYN3O14994 580 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 TLL1O43897 1013 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 NDUFA10O95299 355 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 CALCAP01258 141 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 PDGFRBP09619 1106 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 KIF11P52732 1056 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 ORC1Q13415 861 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 BMS1Q14692 1282 aaKnown RBP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 SHHQ15465 462 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 TMEM173Q86WV6 379 aaPredicted RBP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 CRYBG2Q8N1P7 616 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 SP7Q8TDD2 431 aaPredicted RBP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 ZNF606Q8WXB4 792 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 IGSF21Q96ID5 467 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 RNPC3Q96LT9 517 aaKnown RBP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 HEXIM2Q96MH2 286 aaKnown RBP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 DDX43Q9NXZ2 648 aaKnown RBP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 ADAMTS1Q9UHI8 967 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 PUF60Q9UHX1 559 aaKnown RBP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 THAP12O43422 761 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 CHRNB2P17787 502 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 TNFAIP3P21580 790 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 FUT10Q6P4F1 479 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 GLYCTKQ8IVS8 523 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 COLGALT1Q8NBJ5 622 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 BCL7CQ8WUZ0 217 aaPredicted RBP28.18■■■□□ 2.1
TMEM248-205ENST00000433271 GPR62Q9BZJ7 368 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms