RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 LTB4R2Q9NPC1 389 aa12.75□□□□□ -0.37
HDAC4-202ENST00000430200 DPP3Q9NY33 737 aa12.75□□□□□ -0.37
HDAC4-202ENST00000430200 SEL1LQ9UBV2 794 aa12.75□□□□□ -0.37
HDAC4-202ENST00000430200 CCDC39Q9UFE4 941 aa12.75□□□□□ -0.37
HDAC4-202ENST00000430200 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
HDAC4-202ENST00000430200 DERAQ9Y315 318 aa12.75□□□□□ -0.37
HDAC4-202ENST00000430200 KANSL1LA0AUZ9 987 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 OR6C75A6NL08 312 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 GAP43P17677 238 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 SCP2P22307 547 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 POLR2BP30876 1174 aaKnown RBP12.74□□□□□ -0.37
HDAC4-202ENST00000430200 GPR15P49685 360 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 MYBPC2Q14324 1141 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 UBXN2BQ14CS0 331 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 SLC39A12Q504Y0 691 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 SLC44A4Q53GD3 710 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 OSTM1Q86WC4 334 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 RIN3Q8TB24 985 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 ZSCAN18Q8TBC5 510 aaPredicted RBP12.74□□□□□ -0.37
HDAC4-202ENST00000430200 PYM1Q9BRP8 204 aaKnown RBP12.74□□□□□ -0.37
HDAC4-202ENST00000430200 GZF1Q9H116 711 aaPredicted RBP12.74□□□□□ -0.37
HDAC4-202ENST00000430200 PCIF1Q9H4Z3 704 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 IL21Q9HBE4 155 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 ASAH2Q9NR71 780 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 PANK4Q9NVE7 773 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 SIT1Q9Y3P8 196 aa12.74□□□□□ -0.37
HDAC4-202ENST00000430200 MYH10P35580 1976 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 CYB561D2O14569 222 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 SPTLC2O15270 562 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 XPOTO43592 962 aaKnown RBP12.73□□□□□ -0.37
HDAC4-202ENST00000430200 ITGB3P05106 788 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 SP9P0CG40 484 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 RFX1P22670 979 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 HOXC13P31276 330 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 TXLNAP40222 546 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 TAF6P49848 677 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 CYP4F8P98187 520 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 EHHADHQ08426 723 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 STK38Q15208 465 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 USP37Q86T82 979 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 CD302Q8IX05 232 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 OR5B17Q8NGF7 314 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 SMARCD2Q92925 531 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 SNX21Q969T3 373 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 ACCSQ96QU6 501 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 PKMYT1Q99640 499 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 MTMR12Q9C0I1 747 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-202ENST00000430200 PDE11AQ9HCR9 933 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 KBTBD4Q9NVX7 518 aa12.73□□□□□ -0.37
HDAC4-202ENST00000430200 RBAKQ9NYW8 714 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-202ENST00000430200 TADA3O75528 432 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 MICAL2O94851 1124 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
HDAC4-202ENST00000430200 SOX9P48436 509 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 TFAMQ00059 246 aaKnown RBP12.72□□□□□ -0.37
HDAC4-202ENST00000430200 PRKCQQ04759 706 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 SLFN12LQ6IEE8 588 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 EPM2AIP1Q7L775 607 aaPredicted RBP12.72□□□□□ -0.37
HDAC4-202ENST00000430200 CBWD2Q8IUF1 395 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 GRAMD1CQ8IYS0 662 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 PSMG2Q969U7 264 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 DHX58Q96C10 678 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 ZFYVE19Q96K21 471 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 ZNF512Q96ME7 567 aaPredicted RBP12.72□□□□□ -0.37
HDAC4-202ENST00000430200 TSPAN18Q96SJ8 248 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 SEPT5Q99719 369 aaPredicted RBP12.72□□□□□ -0.37
HDAC4-202ENST00000430200 SMG9Q9H0W8 520 aaKnown RBP12.72□□□□□ -0.37
HDAC4-202ENST00000430200 TRPV4Q9HBA0 871 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 NME7Q9Y5B8 376 aa12.72□□□□□ -0.37
HDAC4-202ENST00000430200 HEPACAM2A8MVW5 462 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 KPNA7A9QM74 516 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 TGFB1I1O43294 461 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 PPP6R2O75170 966 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 IL18RAPO95256 599 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 YEATS4O95619 227 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 F13A1P00488 732 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 GARTP22102 1010 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 GDI1P31150 447 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 PLD1Q13393 1074 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 CYP4A22Q5TCH4 519 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 IQCEQ6IPM2 695 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 TSSK4Q6SA08 328 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 DNAJB7Q7Z6W7 309 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-202ENST00000430200 C1orf210Q8IVY1 113 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 GIPC2Q8TF65 315 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 NOC3LQ8WTT2 800 aaKnown RBP12.71□□□□□ -0.37
HDAC4-202ENST00000430200 DNASE1L2Q92874 299 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 NKD2Q969F2 451 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-202ENST00000430200 CLDN23Q96B33 292 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 CHFRQ96EP1 664 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 IRF2BPLQ9H1B7 796 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 TNMDQ9H2S6 317 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 ZFP14Q9HCL3 533 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms