RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 PLD1Q13393 1074 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 KARSQ15046 597 aaKnown RBP17.94■□□□□ 0.46
VARS-216ENST00000428445 PON2Q15165 354 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 MAMSTRQ6ZN01 415 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 LRRTM3Q86VH5 581 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 STKLD1Q8NE28 680 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 FAM200AQ8TCP9 573 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 PSMG2Q969U7 264 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 TMX3Q96JJ7 454 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 FIZ1Q96SL8 496 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 SEPT5Q99719 369 aaPredicted RBP17.94■□□□□ 0.46
VARS-216ENST00000428445 FAM126AQ9BYI3 521 aaPredicted RBP17.94■□□□□ 0.46
VARS-216ENST00000428445 KCND2Q9NZV8 630 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 GMEB2Q9UKD1 530 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 CDV3Q9UKY7 258 aaKnown RBP17.94■□□□□ 0.46
VARS-216ENST00000428445 K7ESF4 209 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 PIRO00625 290 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 TRAK2O60296 914 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 PIGRP01833 764 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 ATF6P18850 670 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 NRLP54845 237 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 SIM2Q14190 667 aaPredicted RBP17.93■□□□□ 0.46
VARS-216ENST00000428445 MYBPC2Q14324 1141 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 MGAT5BQ3V5L5 792 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 SCARA3Q6AZY7 606 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 ARMCX5Q6P1M9 558 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 GPR161Q8N6U8 529 aaKnown RBP17.93■□□□□ 0.46
VARS-216ENST00000428445 CELF5Q8N6W0 485 aaKnown RBP17.93■□□□□ 0.46
VARS-216ENST00000428445 ODF2LQ9ULJ1 636 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 TCHHQ07283 1943 aa17.93■□□□□ 0.46
VARS-216ENST00000428445 NUP210Q8TEM1 1887 aaPredicted RBP17.92■□□□□ 0.46
VARS-216ENST00000428445 ANO9A1A5B4 782 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 MYBPHLA2RUH7 354 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 H0YCG3 227 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 DPYSL4O14531 572 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 XPOTO43592 962 aaKnown RBP17.92■□□□□ 0.46
VARS-216ENST00000428445 KRT18P05783 430 aaKnown RBP17.92■□□□□ 0.46
VARS-216ENST00000428445 ODC1P11926 461 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 PLCG1P19174 1290 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 CTHP32929 405 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 UBA7P41226 1012 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 ZNF131P52739 623 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 TMEM132DQ14C87 1099 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 ARL6IP4Q66PJ3 421 aaKnown RBP17.92■□□□□ 0.46
VARS-216ENST00000428445 SPEM1Q8N4L4 309 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 E2F7Q96AV8 911 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 CALML4Q96GE6 196 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 SLC46A2Q9BY10 475 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 OXCT2Q9BYC2 517 aaPredicted RBP17.92■□□□□ 0.46
VARS-216ENST00000428445 ZCWPW1Q9H0M4 648 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 IL21Q9HBE4 155 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 PARVGQ9HBI0 331 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 POLR3BQ9NW08 1133 aaPredicted RBP17.92■□□□□ 0.46
VARS-216ENST00000428445 RAB23Q9ULC3 237 aa17.92■□□□□ 0.46
VARS-216ENST00000428445 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.92■□□□□ 0.46
VARS-216ENST00000428445 CYB561D2O14569 222 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 GDF9O60383 454 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 LMNB2Q03252 620 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 PPP2R5DQ14738 602 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 WSCD1Q658N2 575 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 LAIR1Q6GTX8 287 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 PKN3Q6P5Z2 889 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 ZSWIM2Q8NEG5 633 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 RAD54LQ92698 747 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 FAM84AQ96KN4 292 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 PYM1Q9BRP8 204 aaKnown RBP17.91■□□□□ 0.46
VARS-216ENST00000428445 C8orf33Q9H7E9 229 aaPredicted RBP17.91■□□□□ 0.46
VARS-216ENST00000428445 ASB3Q9Y575 518 aa17.91■□□□□ 0.46
VARS-216ENST00000428445 ZNF638Q14966 1978 aaKnown RBP17.91■□□□□ 0.46
VARS-216ENST00000428445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.9■□□□□ 0.46
VARS-216ENST00000428445 PRR5-ARHGAP8B1AHC4 643 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 SLC26A4O43511 780 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 SCP2P22307 547 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 PXNP49023 591 aaPredicted RBP17.9■□□□□ 0.46
VARS-216ENST00000428445 GPR15P49685 360 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 WNT7BP56706 349 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 ARHGAP8P85298 464 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 GTF2BQ00403 316 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 KYAT1Q16773 422 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 SDHAF4Q5VUM1 108 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 TRIM68Q6AZZ1 485 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 ADALQ6DHV7 355 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 USP49Q70CQ1 688 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 BPIFB1Q8TDL5 484 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 KCNN1Q92952 543 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 TASP1Q9H6P5 420 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 GKN1Q9NS71 199 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 TMLHEQ9NVH6 421 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 DPP3Q9NY33 737 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 CCL26Q9Y258 94 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 DENND4CQ5VZ89 1909 aa17.9■□□□□ 0.46
VARS-216ENST00000428445 OTOL1A6NHN0 477 aaPredicted RBP17.89■□□□□ 0.45
VARS-216ENST00000428445 EXTL3O43909 919 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 KRT37O76014 449 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 CYP11A1P05108 521 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 MLLT6P55198 1093 aaPredicted RBP17.89■□□□□ 0.45
VARS-216ENST00000428445 LRRC32Q14392 662 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 RABEP1Q15276 862 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 CCDC6Q16204 474 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 ARHGAP29Q52LW3 1261 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms